KEGG   Pectobacterium parvum: LOZ86_17685
Entry
LOZ86_17685       CDS       T07916                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
ppav  Pectobacterium parvum
Pathway
ppav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LOZ86_17685 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppav03400]
    LOZ86_17685 (uvrA)
DNA repair and recombination proteins [BR:ppav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LOZ86_17685 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LOZ86_17685 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase AAA_23 DnaJ_CXXCXGXG nSTAND3 AAA_25 NACHT cobW Viral_helicase1
Other DBs
NCBI-ProteinID: UFK38710
LinkDB
Position
complement(3911720..3914554)
AA seq 944 aa
MDKIEVRGARTHNLKNINLIIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PEHDVPLDAQTVSQMVDNVLAQPEGKRLMLLAPIVKDRKGEHSKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLAQRLAESFETALDLSGGSVVVADMDDP
TQPELLFSANFACPVCGYSMHELEPRMFSFNNPAGACPSCDGLGVQQFFDPSRVVQNAEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDVDAPFESLSAAVQKVILYGSGKENVEFKY
INDRGDTSIRRHPFEGVLHNMERRYKETESTAVREELAKFISNRSCASCGGTRLREEARN
VFVEQTTLPQISDMSIGHAMTFFQNMKLSGQRAQIAEKVLKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQIVAEGTMEEIMAVPDSLTGQFLSGKRKIEI
PKQRVPADPTKVLKLIGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPLAQR
QLNGATLAEPAAHREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE
ARTRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIQY
KGKGIHEVLDMTIEEAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKL
SRELSKRGTGQTLYILDEPTTGLHFADIQQLLTVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEQSHTARFLRPILAREA
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcgtggtgctcgtacccataatctaaagaatatcaacctgata
attcctcgtgacaagctgattgtaatcaccggtttgtctggttcgggtaagtcatcgctg
gcgtttgacacgctgtatgccgaagggcagcggcgctatgtggaatcactctccgcctac
gcccgtcagttcctgtcgctgatggaaaaaccggacgtcgatcatatagaagggctgtcg
cccgccatctctatcgaacagaaatccacctcgcataacccgcgttccacggtcgggacg
attaccgaaattcatgactacctgcgtctgctgtttgcacgcgtgggtgaaccgcgctgc
ccagagcatgatgtgccgctggatgcgcagacggtcagccagatggtggacaatgtgctg
gcgcagccggaaggcaaacgcctgatgctgctggcgccgattgtgaaagatcgcaaaggc
gaacatagcaagacgttggaaaacctggcttcacagggctatatccgcgcccgtatcgac
ggcgaagtgtgcgatctgtccgatccgccgaagctggaattacagaaaaagcacaccatt
gaagtcgtcgttgaccggtttaaagtgcgcgacgatttggcgcagcggctggctgagtca
ttcgaaaccgcgctggatctgtctggtggtagcgtggtggtcgcggatatggacgacccg
acgcagcctgaactgctgttctcggcgaactttgcctgcccggtgtgtggctacagcatg
catgagctggaaccgcgcatgttctcgttcaataatccggcgggcgcgtgcccaagctgt
gatggtctgggtgtacagcagttcttcgatccgtcccgcgtggtacaaaatgccgagctg
tcgctggcaggcggcgcaattcgcggctgggaccgtcgcaacttctactattttcagatg
ctgcgctcactggcggagcactacaaatttgacgtcgatgccccgtttgaaagcctgagc
gccgcggttcagaaagtgattctgtacggctccggtaaagagaacgtcgaattcaaatat
atcaacgatcgcggcgatacctcgatacgtcgccatccgttcgaaggcgtgctgcacaac
atggagcgccgttataaagagacggaatccacggcggtgcgcgaagagctggcgaaattc
atcagtaaccgttcctgcgccagctgtggcggaacgcgcctgcgtgaagaagcgcgtaac
gtgtttgtcgagcagacgacgctaccgcagatttccgatatgagcatcggccatgcgatg
acgtttttccagaacatgaagctgagtggacaacgcgctcaaatcgccgagaaagtgctg
aaagagattggcgatcgactcaagtttctggtgaatgtcgggctgaactatttgtcgctc
tcccgttcggcggaaacgctgtccggcggcgaggcgcagcgcattcgtctggcgagccag
atcggtgccggactggttggcgtgatgtacgtgctggatgagccgtctatcggcctgcat
cagcgcgacaatgagcgcctgctggaaaccctgattcacctgcgtaatctgggcaatacc
gtcattgtggtggaacatgatgaagatgcgattcgcgccgctgaccatgtgattgatatc
ggccccggtgcgggcgtgcacggcgggcagattgtcgcagaaggcacgatggaagagatc
atggcggtgccggattcgctgacggggcagttcctcagcggtaaacgcaagattgaaatc
ccgaaacagcgcgtgcctgcggatccgaccaaagtgctcaagctgattggcgcgaagggc
aataacctgaaagacgtcacgctgacgctgccagttgggctgtttacctgcatcaccggc
gtgtcagggtcgggtaaatcgacccttatcaacgataccttgttcccactggcgcagcgc
caactgaacggtgcaacgctggcagagcctgccgcacaccgcgagattcaggggctggaa
catttcgataaggtgatcgatatcgatcaaagcccgatcggtcgtacgccgcgctccaac
cctgcaacttataccggtattttcacgccgattcgtgaactgtttgctggcgtgccggaa
gcccgtacccgtggctacaaccccggccgtttcagttttaacgtgcgcggcgggcgctgt
gaagcctgtcagggcgacggcgtgattaaggtcgaaatgcacttcctgccggatgtctat
gtgccgtgtgaccagtgcaaaggcaagcgctataaccgcgaaacgttggagattcaatac
aaaggcaaaggcatccatgaagtgctggatatgaccattgaagaggcgcgagagttcttt
gatgccattccggcgctggcgcggaagctgcaaacgctgatcgacgtcggcctgtcctac
attcgccttgggcagtcggccaccacgctatccggcggggaagcgcagcgtgtgaaacta
tcacgcgagctgtcgaaacgcggaactgggcagacgctgtatattctcgacgaaccaaca
actggcctgcactttgccgatattcagcagcttcttaccgttctgcatcagttgcgcgat
cagggtaataccatcgtggtgattgagcacaatctggatgtgattaaaacggcagactgg
attgtcgacttagggccggaaggcggcagcggcggcggggaaattctggtctccggcacg
ccggaaacggtggcagagtgcgaacagtctcacacagcgcgcttcctgcgaccgattttg
gcgcgcgaagcctga

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