Pectobacterium parvum: LOZ86_18125
Help
Entry
LOZ86_18125 CDS
T07916
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00470
D-Amino acid metabolism
ppav00550
Peptidoglycan biosynthesis
ppav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOZ86_18125 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOZ86_18125 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppav01011
]
LOZ86_18125 (murD)
Enzymes [BR:
ppav01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LOZ86_18125 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppav01011
]
Precursor biosynthesis
Amino acid ligase
LOZ86_18125 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Toprim_C_rpt
Motif
Other DBs
NCBI-ProteinID:
UFK38788
LinkDB
All DBs
Position
complement(4022636..4023952)
Genome browser
AA seq
438 aa
AA seq
DB search
MVDYQGKKVVIIGLGLTGLSCVDFFLACDVVPRVVDTRISPPGLDKLPEQVERHLGSLNE
DWLMSADLIVASPGVALATPILCDAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMARAAGWQVGVGGNIGLPALQLLEQPAQLYVLELSSFQLETTSSLHAAAATILNV
TEDHTNRYPFGLQQYRAAKLRIYEHADLCVVNADDALTMPVRGADARCRSFGVDVGDYHL
NRQQGETWLRVDGERVLNTREIKLVGQHNYTNALAALALADAVKIPRASALTALTSFTGL
PHRFQMAFERKGVRWVNDSKATNVGSTEAALSGLAVEGTLHLLLGGDGKSADFSPLVPYL
QGDHIHVYCFGQDGQQLAALRPDIAEQTETMEQAMRIIAERVKPGDMVLLSPACASLDQF
RSFEQRGDEFARLAEELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggactatcagggtaaaaaagtcgtcattatcgggttgggtctgaccgggctctct
tgtgttgatttctttctcgcatgcgatgtcgtaccgcgcgtggtggatacccgcatcagt
ccgccaggtctggataagctgccggagcaggtagaacgacacctcggtagcttgaatgaa
gactggctgatgagcgcggatttgatcgtcgccagtcctggtgttgcgttggcaacgccg
attctgtgtgacgctgccgacgctggcattgagatcgttggcgatatcgaactgttctgt
cgtgaagcgcaagccccgattgtggcaattaccggttctaacggtaaaagcacggtgacg
acgctagtcggtgaaatggcgcgtgccgcaggctggcaggtgggtgtgggtggcaacatc
ggcctacctgcactgcaactgcttgaacagcctgctcagctttatgtgctggagctgtcg
agttttcaattggaaacgacgagtagcctgcacgccgctgcggcaaccattctgaacgtg
acggaagatcacaccaaccgttatccgtttggtctacagcagtatcgcgcggcgaaattg
cgtatttatgaacacgcagatttgtgtgttgtgaatgctgacgatgcgctgaccatgccg
gttcgcggtgcggatgcgcgctgtcgcagttttggcgtcgatgttggtgattaccatctt
aaccgccagcagggagaaacctggctgcgggtggacggcgaacgtgtgctcaatacccgt
gaaatcaagctggtcgggcagcacaactatacgaacgcattggcagcgctggcgctggct
gatgcagtgaagattccacgtgcgtctgcgctgacggcgttgacgtcatttaccgggctg
cctcatcgctttcaaatggcttttgagcgcaagggcgtacggtgggtcaatgattctaaa
gccaccaatgtgggcagcaccgaggctgcattgagcggtttggcggtagaaggcacgctg
cacctgctgttaggcggtgacggtaaatctgccgatttctcgccgctggtaccgtatttg
cagggcgaccacattcatgtgtactgcttcggtcaggatgggcaacagctggctgcattg
cgtccagacattgccgagcagacagaaacgatggagcaggcgatgcgtatcatcgccgaa
cgcgtaaagccgggcgatatggtgttgctgtcaccagcctgcgcaagcctggatcagttc
cgcagttttgaacagcgaggcgatgaattcgctcgtctggcggaggagttaggctga
DBGET
integrated database retrieval system
