Pectobacterium parvum: LOZ86_18880
Help
Entry
LOZ86_18880 CDS
T07916
Symbol
sctE
Name
(GenBank) type III secretion system translocon subunit SctE
KO
K13285
invasin B
Organism
ppav
Pectobacterium parvum
Pathway
ppav05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
LOZ86_18880 (sctE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_18880 (sctE)
Transporters [BR:
ppav02000
]
Other transporters
Pores ion channels [TC:
1
]
LOZ86_18880 (sctE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
Syntaxin_2
T3SSipB
DUF713
Motif
Other DBs
NCBI-ProteinID:
UFK38924
LinkDB
All DBs
Position
complement(4196519..4198420)
Genome browser
AA seq
633 aa
AA seq
DB search
MNMQLDGFGTFDHIKGSSEASQAELKRQSDLTKRFGNSALKSHSQLGQIKGAIQVLQPEQ
LMKVLQNTHLAMSGNGERADLAQQDIPQLRLLQGSEEVNKSDKNIRADKRLSASAEMNAL
LGKIAQLTNDSSIAKLNAQVHSYNAMMAGMESAYSELVTTLEAQGTQWAENADSLKTSQN
QANKLEKDVNSAQSSLNKAQSTLSELERQAAEQNPVSPELEQQIDEARTAVALAQANLIN
AKSAHENFVAGPLAAAIKAENASRAELNATQAKSNAMVSSLSPQQHSVVEAQRKQRDENT
KSLTFLMALISQLLSKSADEELNAAADLKMKLAEAAAKDAEKKAKEYDAQVRKAEELQKT
LGCIAKVLGWAITAVGFIGAAFTGGASLAIAAVGLALAIGDEICQAVNDGYSFMQAALKP
LMDHIIKPLMEFLAQIYAKALESLGLDKNTSELIGQIIGAISAAVILIGAVMLAGSAASK
LGDVVMKKLGGDVAKKAIQSTMQKMMNNVVGDTIKKMSGGIGRAVGMDSVKMGQWSVRMN
MTKTIASLANTSIQTTGNIVAANMVVNAAKIKASILNNIMLQRMLNEMMDRLVDNYSKRL
ESANAIIKNISSVADNQMQAGKYITKRMSVVAG
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcagcttgatggctttggaacgttcgatcacatcaagggaagctcagaggct
agccaagcggagctaaaaagacagagtgatctgacgaagcgttttggaaattcggcatta
aaaagtcattcccaattaggtcaaatcaaaggagccattcaggtactacagcctgagcag
ctaatgaaggtgttgcagaatacgcatctcgcaatgagtggcaacggcgaaagagcagat
cttgctcaacaagatattcctcaactgaggttgctgcaaggaagcgaggaggtcaacaag
agtgataaaaatattcgtgcagataaacgcctcagcgcctctgctgaaatgaatgcgttg
ttaggaaaaatagctcagcttaccaatgacagctcaattgcaaaactgaatgcgcaagtc
cacagctataatgccatgatggcgggaatggaaagtgcgtattctgaactggtcacgacg
cttgaagcacaggggactcagtgggctgaaaatgctgattccttaaaaacatcacaaaat
caggcaaataagctagagaaggatgttaacagtgcgcaatcctcattgaataaagcgcag
agtacattgagcgaacttgaacgtcaggctgcagagcagaatccagtttctccagaacta
gaacagcaaattgatgaagccagaaccgcggtagcgctggctcaggctaatttgattaat
gcaaaatctgcgcatgaaaatttcgttgctggtccactcgctgctgcaattaaagcggaa
aatgcgtctcgtgcggaactcaatgcgacacaggctaagtctaacgctatggtgagttct
ctttctccacagcagcactctgtcgttgaagctcagcgtaaacaacgtgatgaaaacacg
aaaagcctcacatttctaatggctctgatttctcagctgctcagcaagagcgcagacgaa
gagcttaacgcagcggctgatttgaagatgaaactcgctgaagctgctgctaaagatgcg
gaaaaaaaggcaaaagaatacgacgcgcaggtacgtaaagctgaggaactgcaaaaaact
ctggggtgcattgccaaagttttaggctgggcgattactgctgtgggctttattggtgcc
gcttttacgggcggggcatctctggcaatcgcggctgtagggctagcgttagcgattggg
gatgaaatatgccaggctgttaatgacgggtactccttcatgcaggctgcactgaagcct
ttaatggatcatattataaagccattgatggagtttctggctcaaatatatgctaaagct
cttgaatcgctcggtcttgataaaaacacatctgaacttatagggcagattataggagcg
attagtgcagcggtgatattgattggtgcagtgatgctcgcagggagtgcggcaagtaaa
cttggtgatgtcgtcatgaaaaaacttggtggtgatgttgctaaaaaagccattcagagc
acgatgcaaaaaatgatgaataatgtggtcggcgacacgattaaaaaaatgagtggggga
attgggcgtgcggttggcatggattcggtcaaaatggggcagtggtctgtacgcatgaat
atgacaaaaactatcgcttcgcttgccaatacttcgatacagactacaggaaatattgtt
gctgcaaatatggtggttaatgcggcaaaaataaaggcaagtatcctgaataatattatg
ctacagcgtatgctaaatgaaatgatggatcgcttggtggataactacagcaagcgcctg
gaaagtgctaatgctattattaaaaatatttcttccgttgctgataaccaaatgcaagca
ggtaaatatattaccaaacgaatgagtgtcgtggctggataa
DBGET
integrated database retrieval system
