Pectobacterium parvum: LOZ86_19095
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Entry
LOZ86_19095 CDS
T07916
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppav03400
]
LOZ86_19095 (radA)
DNA repair and recombination proteins [BR:
ppav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LOZ86_19095 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
GvpD_P-loop
SLFN-g3_helicase
AAA_14
ABC_tran
AAA_22
RecA_N
Rad51
nSTAND_NTPase5
AAA_24
AAA_16
NTPase_1
Zeta_toxin
AAA
cobW
nSTAND3
Viral_helicase1
T2SSE
AAA_5
AAA_29
PAXNEB
Herpes_Helicase
DZR
Motif
Other DBs
NCBI-ProteinID:
UFK38966
LinkDB
All DBs
Position
4251523..4252905
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AA seq
460 aa
AA seq
DB search
MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLASASVSRSDRLTGYAGESAGV
SRVQKLSEISLEALPRFSTGFQEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTLCKLS
ENMKTLYVTGEESLQQVAMRAHRLNLPTQNLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHLADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREISNPSAIFLSRGDEITSGSSV
MVVWEGTRPLLVEIQALVDQSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVTETSADLALLLSLVSSFRDRPLPQDLVIFGEVGLAGEIRPVPSGQERITEAA
KHGFKRAIVPHANMPKKAPASMQVFGVKKLADALAILDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagccgtcaaacgggcatttgtatgtaatgaatgcggggctgactacccgcgc
tggcaagggcagtgcagtgcctgccatgcctggaacaccattaccgaagtccgcctggcc
tcggcgtcagtatcacgttccgaccgtctcaccggctatgcgggcgaaagcgctggcgtc
agccgggtacagaagctctcggaaatcagtcttgaagctctgccgcgattttctaccggc
tttcaggagtttgatcgcgttctgggcggcggcgtcgttcccggcagcgccattctgatc
ggcggtagccccggcgcgggtaaaagtaccctactgttgcaaacgctctgcaagctgtca
gaaaacatgaaaaccctgtacgtcaccggcgaagaatcgttgcagcaggtggcaatgcgg
gcacaccgcctcaatctgccgactcagaatctcaacatgctgtcggaaaccagcatcgaa
cagatttgcctgattgccgaacaggaacagccgaagctgatggtgatcgactccattcag
gtcatgcatctcgccgatattcaatcgtctcccggcagcgtggcgcaggtgcgtgaaacc
gccgcctacctgacccgcttcgctaaaacgcgcggcgttgctatcgtgatggtcggccac
gtcaccaaagacggttcgctcgccgggccaaaagtattggaacactgcatcgactgctcc
gtgctgctggacggcgatgccgattcccgcttccgtaccctgcgcagccataaaaaccgt
ttcggtgccgttaacgaactgggcgtattcgcaatgacggaacaggggctacgcgagatc
agcaatccgtcggcaattttcctcagccgtggggacgaaatcacgtccggcagttcggtc
atggtggtgtgggaaggtacgcgtccgctgctggtcgagattcaggcgctagtggatcag
tcgatgatggccaacccgcgtcgcgtcgcggtcgggctggagcaaaaccgcttggcgatc
ctgctggcagtgctgcatcgccacggcggcttgcagatgtcggatcaggatgtgttcgtg
aatgttgtcggcggcgttaaagtcaccgaaaccagtgccgacctggcgctgctgctatcg
ctggtctccagcttccgcgaccgcccgctgccgcaggatcttgtcatcttcggtgaagtc
ggtctggcgggagaaatccgcccggttccaagcggacaagaacggattaccgaagccgcc
aagcacggcttcaaacgcgccatcgttcctcatgccaatatgccgaagaaagcccctgcc
agcatgcaagtgttcggtgtgaaaaagctagccgacgcgctggcaatcctcgacgatctc
taa
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