Pectobacterium parvum: LOZ86_20775
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Entry
LOZ86_20775 CDS
T07916
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppav03016
]
LOZ86_20775 (trmA)
Enzymes [BR:
ppav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
LOZ86_20775 (trmA)
Transfer RNA biogenesis [BR:
ppav03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LOZ86_20775 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Cons_hypoth95
Methyltransf_4
MTS
Methyltransf_31
Methyltransf_11
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_12
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
UFK39268
LinkDB
All DBs
Position
4602626..4603738
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AA seq
370 aa
AA seq
DB search
MTPEILPIEQYDDQLAEKTERLRGMMAPFNAPEPVVFRSPVSHYRMRAEFRIWHDGDELY
HIMFDQQTKQRIRVDRFPAASELINRLMPELLAAIQPDPVLRRKLFQIDYLSTLSGEVIV
SLLYHRALDEEWQEHARALRDSLIAQGFRLQLIGRAAKTKICLDRDYVDECLPVAGRDMI
YRQVENSFTQPNAAINIQMLEWALDATAGSTGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANQIENVQIIRMAAEEFTQAMQGVRQFNRLQGIDLTSYQCETIFVDP
PRSGLDDETVKLVQAYPRILYISCNPETLSNNLQTLSETHDIRRLALFDQFPYTHHMECG
VLLERKTSSH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagaaatcctgcccatcgaacaatacgacgaccagcttgcagagaaaaccgag
cgtctacgtggaatgatggcacctttcaatgcaccggagcctgtcgtcttccgttctccc
gtcagccactatcggatgcgcgccgaattccgtatctggcacgatggcgacgagctttac
cacatcatgtttgaccagcaaaccaaacagcgcattcgggtcgatcgctttccggcagcc
agtgaactgatcaaccgcctgatgccggaactgcttgccgccattcagcctgatcccgtt
ctgcgccgtaagctgttccagatagattatctgtccaccctgagcggcgaagtgatcgtt
tctctgctgtatcaccgcgcactggatgaggagtggcaggaacatgcccgtgcgctgcgc
gatagcctgatagcgcaggggttccgtctacagctgattggtcgcgcggcgaaaactaaa
atctgcctcgatcgcgattatgtcgatgaatgtctgccggttgcaggtcgggatatgatt
taccgacaggtagaaaacagcttcacgcagccgaatgcggcaatcaatattcagatgctg
gaatgggcgctggatgcgacggcgggatcaacaggggatttgttggaactgtattgcggt
aacggcaatttttcactcgcgctggcaagaaacttcgaacgcgtgctggcgactgaaatc
gccaaaccatccgtcgcggcagcacaatataatatcgcggcgaatcagatagagaacgtg
cagattatccgtatggcggcagaagaatttacgcaggctatgcagggcgtgcgtcagttt
aaccgcttacagggtatcgatctaacgagctaccagtgcgagaccatttttgttgacccg
ccgcgcagcggactggatgacgaaacggtgaagctggtacaggcgtatccacgcattctt
tatatttcctgcaacccagaaacgctgagcaacaacctgcaaacgctatcggaaacccac
gacattcgccgtctggcgctgttcgaccaattcccttacacccatcatatggagtgtggc
gtactgttggaacgcaagacctcttctcattga
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