Pseudomonas putida BIRD-1: PPUBIRD1_0018
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Entry
PPUBIRD1_0018 CDS
T01975
Name
(GenBank) LysR family transcriptional regulator
KO
K21711
LysR family transcriptional regulator, putative pyruvate carboxylase regulator
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_0018
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPUBIRD1_0018
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
ADR57728
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Position
16714..17577
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AA seq
287 aa
AA seq
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MTQPAVSLQIRQLEELIGQPLFEYVGKKLYLTEAAEALQRASHDIFGRLESLDMQLSDMQ
GSLQGQLKLAIESSAKYFVPHLFAAFKQRHPEVNLTLTVVNRAQAIRRLSDNRDDLIIMS
MVPQDMGLEFLPFLNNPIVAVAPPQHPLCKLEQLRMQDLEPHTLLVREQGSGTRKACEEY
FKDKRVHFAQTLEVASADAQRECVIAGLGIALLTRHAVNLELATGMLKELPVEELPLYRS
WCVVQAKAKRQSPVALAFLAFIRGERALISALVERFSGKLPPTTAIP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcaacccgccgttagtctacagatccgccagcttgaagagctgatcggccagcca
ttgttcgagtacgtcggcaagaagctctacctgaccgaggcggccgaggccttgcagcgc
gccagccacgatatcttcgggcgcctggaaagcctggacatgcagctgtcggacatgcag
ggctcactgcagggtcagttgaaactggcgatcgagtccagtgccaagtacttcgtgcca
cacctgttcgccgccttcaagcagcgtcacccggaagtcaacctgaccctgacggtagtc
aaccgtgcccaagccatccgccgcctttccgataaccgcgacgacctgatcatcatgtcg
atggtgccgcaagacatgggcctggagtttctgccgttcctcaacaacccgatcgttgcg
gttgcgccgccacagcacccgctgtgcaagctggagcagttgcgcatgcaggacttggag
cctcataccctgctggtccgcgagcaaggttcgggaacacgcaaggcgtgcgaagagtac
ttcaaggataagcgtgtgcatttcgcccaaacgcttgaagtagcctcggccgacgcccag
cgcgaatgcgtgatcgccgggctggggatcgccctgttgacccgtcacgcagtcaacctg
gagctggctaccgggatgctgaaggaattaccggtcgaggagctaccgctgtaccgtagc
tggtgcgtggtgcaggccaaggccaagcggcagtcgccggtggccttggcgtttcttgca
ttcatacgcggcgaacgtgctcttatcagcgcgcttgttgaacgtttttctgggaagttg
ccgccgacgactgccataccgtga
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