Pseudomonas putida BIRD-1: PPUBIRD1_0019
Help
Entry
PPUBIRD1_0019 CDS
T01975
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_0019
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
Other families
PPUBIRD1_0019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
ADR57729
LinkDB
All DBs
Position
complement(17947..18813)
Genome browser
AA seq
288 aa
AA seq
DB search
MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREHLDPQALQQ
AVSAMAQAQRVEFYGFGASGAVAADAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAV
CISQSGRSKDLLITANLVRESGANLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSIKATDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgttgcaacatatcgcccaatcgcgccacctgctgcgcaaatcggaactgaaa
gtggccgaccacgtgctgctcgacccggctgccgtcatgcacagctccatggccgatttg
gcgcacagcgtgggtatcagtgagccgaccatcgtgcgtttctgccgggccattggctgc
tcgggcttccaggacctgaagctgaaactggcgcaaagcctggctgccggggccagcttc
gggcagttcgccatccacgaagacgattcggtcgctgactacagcctgaagatcttcgac
accaccctgcacaccctgatggaagtgcgcgagcaccttgatccgcaggcgctgcaacaa
gccgtgagcgccatggcccaggcgcagcgggtagagttctacggctttggcgcgtccggt
gcggttgccgccgatgcccagcacaagttcttccgcctgctgctcagcgcggcagcgtat
tccgacccgcacatgcaagcgatgtcggccgttaccctgaagccgggcgatgtggctgtg
tgtatttcccagtcgggccgttccaaggacctgctgatcactgccaacctggtgcgtgag
agcggcgcaaacctgattaccctgtgccccagccagacgccgctggccgagctatcgaca
gtcaacctggcgatcgacgtgcatgaagacaccgagatctacaccccactgacctcgcgt
attgcccacctggtggtgatcgacgtgctggcgatgggcgttgccatggcgcgcgggcct
agcctggtcaaccacctgaagagcgtgaaacgcagcctgcgcagcttgcgtctgtcgccc
aaatcgatcaaggctacagacgactga
DBGET
integrated database retrieval system
