Pseudomonas putida BIRD-1: PPUBIRD1_0036 Help Entry PPUBIRD1_0036     CDS       T01975                                  Symbol lpd3 Name (GenBank) Lpd3   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism ppb  Pseudomonas putida BIRD-1 Pathway ppb00010   Glycolysis / Gluconeogenesis ppb00020   Citrate cycle (TCA cycle) ppb00260   Glycine, serine and threonine metabolism ppb00280   Valine, leucine and isoleucine degradation ppb00310   Lysine degradation ppb00380   Tryptophan metabolism ppb00620   Pyruvate metabolism ppb00630   Glyoxylate and dicarboxylate metabolism ppb00640   Propanoate metabolism ppb00670   One carbon pool by folate ppb00785   Lipoic acid metabolism ppb01100   Metabolic pathways ppb01110   Biosynthesis of secondary metabolites ppb01120   Microbial metabolism in diverse environments ppb01200   Carbon metabolism ppb01210   2-Oxocarboxylic acid metabolism ppb01240   Biosynthesis of cofactors Module ppb_M00009   Citrate cycle (TCA cycle, Krebs cycle) ppb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate ppb_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA ppb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA ppb_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:ppb00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     PPUBIRD1_0036 (lpd3)    00020 Citrate cycle (TCA cycle)     PPUBIRD1_0036 (lpd3)    00620 Pyruvate metabolism     PPUBIRD1_0036 (lpd3)    00630 Glyoxylate and dicarboxylate metabolism     PPUBIRD1_0036 (lpd3)    00640 Propanoate metabolism     PPUBIRD1_0036 (lpd3)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     PPUBIRD1_0036 (lpd3)    00280 Valine, leucine and isoleucine degradation     PPUBIRD1_0036 (lpd3)    00310 Lysine degradation     PPUBIRD1_0036 (lpd3)    00380 Tryptophan metabolism     PPUBIRD1_0036 (lpd3)   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     PPUBIRD1_0036 (lpd3)    00670 One carbon pool by folate     PPUBIRD1_0036 (lpd3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ppb04147]     PPUBIRD1_0036 (lpd3) Enzymes [BR:ppb01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      PPUBIRD1_0036 (lpd3) Exosome [BR:ppb04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    PPUBIRD1_0036 (lpd3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like Pyr_redox_3 NAD_binding_8 AlaDh_PNT_C GIDA FAD_binding_2 FAD_binding_3 Lys_Orn_oxgnase Thi4 Lycopene_cycl Amino_oxidase DAO 3HCDH_N Motif Other DBs NCBI-ProteinID:  ADR57746 LinkDB All DBs Position 35574..36974 Genome browser AA seq 466 aa AA seqDB search MKSYDVVIIGGGPGGYNAAIRAGQLGLSVACVEGRSTLGGTCLNVGCMPSKALLHASELY EAASGDEFAHLGIEVKPTLNLAQMMKQKDESVTGLTKGIEYLFRKNKVEWIKGWGRLDGI GKVVVKAEDGSETALQAKDIVIATGSEPTPLPGVTVDNQRIIDSTGALSLPQVPKHLVVI GAGVIGLELGSVWRRLGSQVTVIEYLDRICPGTDTETAKTLQKALAKQGMVFKLGSKVTQ ATAGADGVSLTLEPAAGGTAESLQADYVLVAIGRRPYTKGLNLESVGLEADKRGMLGNEH HRTSVPGVWVIGDVTSGPMLAHKAEDEAVACIERIAGKPHEVNYNLIPGVIYTRPEMATV GKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVIADAETDEVLGVHLVGPSVSE MIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVDGMAMQI NT seq 1401 nt NT seq  +upstreamnt  +downstreamnt atgaaatcctatgacgtggtgatcatcggcggtggccctggcggctacaacgcagccatc cgtgctggccagttgggcctgagcgttgcctgcgtggaaggccgctcgaccttgggcggt acctgcctgaacgtcggctgcatgccatccaaggcgctgctgcatgcttcggagctttac gaagctgccagcggtgacgagttcgcccacctcggtatcgaagtaaagcccaccctcaac ctcgcccagatgatgaaacagaaggatgagagcgtgacaggcctgaccaagggcatcgaa tacctgtttcgcaagaacaaggtcgagtggatcaaaggctggggccgcctggacggcatc ggcaaggtcgtggtcaaggccgaagacggtagcgaaaccgcgttgcaggccaaggacatc gtcattgccaccggctctgagcccacccctctgccaggtgtgaccgtcgacaaccagcgc atcattgactcgaccggcgcgctgtcgctgccgcaagtgcccaagcacctggtcgtcatc ggtgctggcgtgatcggtcttgagctgggttcggtctggcgccgcctgggtagccaggtc actgtcatcgaatacctggatcgcatctgcccaggcactgacacggaaacggccaagacc ctgcagaaggcgctcgccaagcaaggcatggtgttcaagctgggcagcaaagtgactcag gctaccgcaggtgccgatggcgtcagcctgacgctggagcctgccgcagggggtaccgca gaatcgctgcaagccgattacgtgctggtggctatcggccgtcgcccttataccaaaggg cttaacctggaaagcgtgggcctggaagccgacaagcgcggcatgctcggcaacgagcac caccgtacctcagtgccgggtgtctgggtgattggcgacgtcacttcgggcccaatgctg gcgcacaaggcggaagacgaagcggtggcctgtatcgaacgcatcgccggcaagccccac gaggtcaactacaacctcatccctggcgtgatctatacccgcccggagatggccaccgtg ggcaagactgaagagcagctcaaggccgaagggcgtgcctacaaggttggcaagtttccc ttcaccgccaacagccgtgccaagatcaatcacgagaccgaaggcttcgccaaggtcatc gccgatgccgaaaccgatgaagtactaggtgtgcacctggtgggcccaagcgtcagcgag atgattggtgagttctgcgtggctatggagttctcggcctcggcagaagatatcgccctc acctgccacccgcacccgacgcgctccgaggccctgcgccaggcggcgatgaatgtggat ggcatggccatgcaaatctga

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