Pseudomonas putida BIRD-1: PPUBIRD1_0052
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Entry
PPUBIRD1_0052 CDS
T01975
Name
(GenBank) Regulatory protein, IclR
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_0052
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PPUBIRD1_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR
MarR_2
TrmB
HTH_5
HTH_24
DUF1803
HTH_27
Vps39_2
HTH_45
HTH_20
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADR57762
LinkDB
All DBs
Position
55903..56640
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AA seq
245 aa
AA seq
DB search
MEAFTAESDELTLSQIAAKAELDPGTTYRMLNTLVDLGYVSRIPESKRFSLTLKILNLGF
HAIAHTDLRSLVRPVLRGLVSETSEAASFAVLQGADVLYLERVRAGITRLGVDIRIGTTV
PACQTAIGQSILAFLPDHEVERIKELSSSTSFMSKSLSRPLSEVLEQIRKDGYIITESLF
AEGLRILAVPVLDIDGYPVGAISIAAPAVRCTTEELERRALSVTIAAAKNIGRALQASGS
INSSL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
ttggaggccttcacagcggaaagcgatgagctgaccctgagccagattgctgccaaggcc
gagctcgacccaggcacgacctatcgcatgctgaatacgctggtggacctcggctatgtt
tctcgaattcctgagagcaagcgattctccctcacgctcaaaatcctcaacttgggcttc
cacgccattgctcacacggacttgcgcagtctggttcgcccagtgctaagggggctggtc
agtgaaaccagtgaagccgcaagcttcgccgtgttgcaaggcgcagacgtcctctacctg
gaacgtgtcagggctggtatcactcggcttggagtggatattcgcattggcacaacggtg
ccggcttgccagacagcgattggccaatcaatcctcgcgttccttcctgatcacgaagtt
gagcgcatcaaagagctttcctcgtccacgtccttcatgagcaaatctctctcacggccg
ttgtccgaggtgttggagcagatccgtaaggatgggtacatcatcacggaatcgctgttc
gccgagggcctgcgcatcctcgccgttccggtcctggatatcgacggctacccagttggc
gccatcagcatcgcggcgccggcagtgcggtgcaccacggaggaacttgaacgtcgagcg
ctgtccgtgaccattgcggcggcgaagaatatcgggcgagcactacaagcaagcggaagc
atcaattccagcctgtaa
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