Pseudomonas putida BIRD-1: PPUBIRD1_0159
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Entry
PPUBIRD1_0159 CDS
T01975
Name
(GenBank) EAL domain containing protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PPUBIRD1_0159
Enzymes [BR:
ppb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PPUBIRD1_0159
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
CcmD
Motif
Other DBs
NCBI-ProteinID:
ADR57868
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Position
166012..167610
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AA seq
532 aa
AA seq
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MSAFIALLRQIFYRPWMLATLAALASAAVLLSASIGIALQQMKQSESEQMNAQGERFLER
LEQVFGQLREGVDLLQAQPLRGCNPAMLAALQQVGLNSRFIYEAAYVDGNVACSNRGDER
AFVPLRAPDIQGPTYSYWLNTTTEPNENLAALMLGRGKFLVSTSRGHLTDVVDLPPGGSL
VVVLDNGARAIPVLGPPQVWPPPSAWSTSHKSLLELSDRLIYRMPTKSPDYQLVLIAPRA
SLPLKMNGMLWLLFPGSVLAACCIGWLVLQLILQRRSMSSELQNALRRGELQVLYQPIIE
LDSRRCVGAEALVRWRRPDGTLTSPDLFIPLAENTGQIRQITDFVLQRVLEQLGQLLRSH
PKLYISINLAACDVMVPRIGRVAARLLALHRVAPSQIAFEVTERGLIDVVVARDNLQALR
AVGHQVLIDDFGTGYCSLAYLQTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHDLH
LRVIAEGIEFEDQAVLLNSEGVNYGQGWLFARPLNARQFAELVTRGHLPRRV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccttcatcgccttgctgcgccaaattttttaccgtccctggatgctggccact
ttggcagcgctggccagcgccgcggtgttgctctctgccagcatcggcattgccctgcaa
caaatgaaacaaagcgaaagcgaacagatgaatgcccagggcgagcgttttctggaacgg
ctcgaacaggtgttcggccaattgcgcgaaggggtcgacctgctgcaggcccaacccttg
cgcggctgcaacccggcaatgctggcagccttgcagcaggttggcctgaactcgcggttc
atctatgaagcggcttatgtagatggcaatgttgcctgctccaaccgcggtgatgagcga
gcgttcgttcccttgcgggcgccagatatccaggggccgacgtacagttactggcttaac
accaccaccgagccgaacgagaacctggcagcactgatgctgggccggggcaagtttctg
gtttccacctcccgtgggcatttgaccgatgtggtggacctgcccccaggtggcagcctg
gtcgtggtgctcgacaacggcgcccgggccattccggtgctcggcccgccacaggtatgg
ccaccgccctcggcctggtcgaccagccacaagtcgctgctggaactcagtgatcggctg
atctaccgaatgccgaccaagtcgccggattaccagttggtgctgattgccccgagggcc
agtctgccgctgaagatgaacggcatgctctggttgctgttccccggtagcgtgctggcg
gcctgctgcatcggttggttggtactgcagttgattctgcaacgacggtcgatgagttca
gagttgcagaatgccttgcgtcgtggagagctgcaggtgctctaccagccaatcatcgag
ctcgacagccggcgctgtgtgggcgccgaggccttggtgcgctggcgccgcccggacggc
accctgaccagcccggaccttttcattccgctggcggagaataccgggcagattcgtcag
atcaccgactttgtcctgcagcgtgtgcttgagcagctaggacagctactgcgctcgcac
cccaagctatacatatcgataaacctggcggcctgcgatgtgatggtgccacgtattggc
cgggtggcggcgcgcttgttggccttgcatcgagtggcgcccagccagattgccttcgag
gtgaccgagcgcggcctgatcgacgtggtggtcgcccgtgacaatctgcaggcgctacgt
gccgtggggcaccaggtgctgatcgacgactttggtaccggttattgcagcctggcctac
ctgcaaaccctgccagtggactgcctgaagatcgacaaggcattcatcgacgctctgggc
cacgatgccgccagtagcggcgtggccccgcatatcatccgcatggcccatgacttgcac
ttgcgggtaattgccgaaggtatcgagttcgaggaccaggcggtgctgctgaacagcgag
ggggtcaattatggccagggctggttgtttgcccggccgctgaacgcccggcagtttgcc
gagttggtgactcgtgggcacctgccgcggcgggtgtag
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