KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_0290
Entry
PPUBIRD1_0290     CDS       T01975                                 
Name
(GenBank) Two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PPUBIRD1_0290
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ppb02022]
    PPUBIRD1_0290
Two-component system [BR:ppb02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PPUBIRD1_0290
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_2 HTH_50 HTH_8 FleQ AAA sCache_3_2 DUF6716
Other DBs
NCBI-ProteinID: ADR57993
LinkDB
Position
complement(336000..337406)
AA seq 468 aa
MTTETLIDSRAQVILVDDDPHLRQALSQTLDLAGLKVVALAEAQGLAERIEADWPGVVVS
DIRMPGIDGLQLLEQLHGRDSELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFATDALLD
SVRRALALRRLVLDNRSLRLALSDRQQLATRLVGHSPAMLRLREQIGALAGTRADVLILG
ETGAGKEVVARALHDLSSRSEGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRMLQERVVERLGGNQLIPLDIRIIAATKEDLRQAA
DQGRFRADLYYRLNVAPLRIPPLRERGDDILVLFQHFADAASQRHGLSPHALQPAQRALL
LRHDWPGNVRELQNAAERFALGLELALDGQAPSAAAPAAPMLSGNLSEQVEQFERSLIAA
ELAQPHGSMRSLAEALGIPRKTLHDKLRKHGLNFDGGSGGHDDQEDNR
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaccaccgagacactgatcgacagccgagcccaggtcatcctggtcgacgatgacccc
cacctgcgccaagccttgagccagaccctggacctggccgggctcaaggtagtcgccctg
gccgaagcccaaggcctggccgagcgcatcgaggccgactggcccggcgtggtggtcagc
gacatccgcatgccgggcatcgatggcctgcagttgctggaacaactgcacggccgcgac
agcgaactgccggtgctgctgattaccggccatggcgatgtgccgctggcggtgcaggcg
atgcgcgccggggcttatgacttcctggaaaaaccctttgccacagacgccctgctcgac
agcgtgcgccgcgccctggctttgcgccggctggtgctggacaaccgtagcctgcgtctg
gcactgagcgaccgccagcaactggcaacccgcctggtcggccattcaccggcgatgctg
cgcctgcgcgaacagatcggcgccttggccggcacccgcgccgacgtgttgattctgggc
gaaaccggcgctggcaaagaggtggtggcccgcgcgctgcacgacttgtccagccgcagc
gaagggccgttcgtggcgatcaacgccggcgcgctggccgaatcggtggtcgaaagcgaa
ctgttcggccacgagcccggtgcattcaccggcgcgcagaaacgccgtatcggcaagttc
gaatttgccaacggcggtacactgttcctcgacgaaatcgagagcatgagcctggatgta
caggtgaagttgctgcgcatgctgcaagagcgagtggtcgaacgcctgggcggcaaccag
ttgatcccgctggacatccgcatcatagccgccaccaaggaagacctgcgtcaggctgcc
gaccaagggcgtttccgcgcggacttgtattaccgcctgaacgtggcgccgctgcgtatt
ccgccactgcgtgaacgcggcgacgacatattggtgttgttccagcatttcgccgatgct
gccagccaacgtcatggcctgtcgccgcatgcgctgcaacccgcgcaacgcgccctgctg
ctgcgtcatgactggccaggcaacgtccgcgagctacagaacgccgccgagcgtttcgcc
cttggcctggaactggcactggatggccaggcgccctcggcagcagcaccggcagcgccc
atgctcagcggcaacctcagcgagcaggtcgagcaattcgaacgctcgctgatcgccgcc
gaactggcccagccacacggctccatgcgaagcctggccgaagcactgggtatcccccgc
aaaaccctgcacgacaagctgcgcaagcatggcttgaacttcgacggcggcagcggaggg
catgacgatcaagaggacaaccgttaa

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