Pseudomonas putida BIRD-1: PPUBIRD1_0334
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Entry
PPUBIRD1_0334 CDS
T01975
Name
(GenBank) AraC family transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_0334
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PPUBIRD1_0334
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADR58035
LinkDB
All DBs
Position
386233..387177
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AA seq
314 aa
AA seq
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METIAFLLVPGFSAMGFISAVEPLRVANRFGGQLYRWQVLSLDGEAVLASNGMSINADAA
LGEGEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYR
ATLHWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVKV
SEQFVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLTTLELAAAIKVTRR
QLERLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLRF
GRCPREERRPSGTK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagacgattgcctttctgttggtgcccggcttttctgccatggggttcatttcggcg
gtggagccgctgcgggtggccaatcgttttggtgggcagttgtaccggtggcaggtgctt
agcctggacggtgaggcggtgctggcgagcaatggcatgtcgatcaatgccgatgccgcc
ctgggggagggcgagccggccaacatcctgctggtggtcgcgggcttcgaaccactggcc
aatgtcgcacccaaactgctgcatgcgttgcgccggctcaaccacgaagctgtcatgctc
gggggcatcgatacgggcgcgatggtgctggccgaggcagggctgctcgagggctaccgg
gcgacattgcattgggaggcgcttgaggcattcaaggagcgctacccaggccttcaagct
acccaggagctgttcgagattgaccgcagccgcatcacctgtgccggcggaacggcctca
atcgatttgatgctgcacctgattgcccaatctcacggcagcgaactggcggtcaaggtg
tccgagcagttcgtgctgggtcgtatccgtcagcgccaggaccaccagcgcatgcagatc
ggtgcgcgttatggcatcagcaacaagaagctggtccatgccattggagaaatggaaaaa
cacatcgagccaccgctgactacgctggaactggctgccgcgatcaaggtgacacggcgt
caactggagcgtttgtttcgcatgcaccttgatgcaacaccgagcggtttctatcttggg
ttacggctggacaaggcgcgccagctgttggcccagaccgacatgtcggtgactgaagtc
agccttgcgtgcgggtttgaactgccatcctatttcacgcggcgctacaagctgaggttt
ggacggtgcccgcgggaagagcgacggcccagcggtacaaagtga
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