Pseudomonas putida BIRD-1: PPUBIRD1_0461
Help
Entry
PPUBIRD1_0461 CDS
T01975
Name
(GenBank) CAMP-regulatory protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02020
Two-component system
ppb02024
Quorum sensing
ppb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPUBIRD1_0461
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPUBIRD1_0461
02025 Biofilm formation - Pseudomonas aeruginosa
PPUBIRD1_0461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_0461
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
PPUBIRD1_0461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
TrmB
MarR_2
MarR
bAvd
HTH_11
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ADR58155
LinkDB
All DBs
Position
complement(536208..536879)
Genome browser
AA seq
223 aa
AA seq
DB search
MRHIEQDFVMVASALPAKIKNIDKLLVHCQRRRYTAKSNIICAGDRAETLSFIIKGSVTI
LIEDDDGHEMIIAYLNNGDFFGELGLFEPVDGEQQRSAWVRAKTECEVAEISYEKFRELA
RQDPEILYALGSQMAQRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIK
ITRQEIGRIVGCSREMVGRVLKDLEERSLVQVKGKTMVVYGTR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatatcgaacaggatttcgtgatggttgcctccgccctacccgccaagataaag
aacatcgacaagctactggtacactgccagcgccgccgctacaccgccaaaagcaatatc
atctgcgccggcgaccgggccgagacactgtcttttatcatcaagggttcggtcaccatc
ctcatcgaggacgacgacggccatgaaatgatcattgcctacctcaacaatggcgatttt
tttggcgagctaggcctgttcgagcccgttgatggcgagcagcagcgcagtgcctgggta
cgcgccaagaccgaatgcgaagtggccgaaatcagctacgagaagtttcgcgagctggcg
cgccaggacccggaaatcctctatgccctgggtagccagatggcccagcgcctgcgcaac
accacgcgcaaggttggcgatttggcatttttcgacgtcaccgggcgagttgcccgttgc
ctgctggaactgtgcaagcagcccgacgccatgacccaccccgatggcatgcaaatcaag
attacccgtcaggaaattggccgaatcgtcggttgctctcgggaaatggtcggccgcgtt
ctcaaagaccttgaggaacgcagcctggtgcaggtcaagggcaagaccatggtggtctac
ggtacccgctag
DBGET
integrated database retrieval system
