Pseudomonas putida BIRD-1: PPUBIRD1_0473
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Entry
PPUBIRD1_0473 CDS
T01975
Symbol
tyrS
Name
(GenBank) TyrS
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPUBIRD1_0473 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppb01007
]
PPUBIRD1_0473 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppb03016
]
PPUBIRD1_0473 (tyrS)
03029 Mitochondrial biogenesis [BR:
ppb03029
]
PPUBIRD1_0473 (tyrS)
Enzymes [BR:
ppb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
PPUBIRD1_0473 (tyrS)
Amino acid related enzymes [BR:
ppb01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PPUBIRD1_0473 (tyrS)
Transfer RNA biogenesis [BR:
ppb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PPUBIRD1_0473 (tyrS)
Prokaryotic type
PPUBIRD1_0473 (tyrS)
Mitochondrial biogenesis [BR:
ppb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PPUBIRD1_0473 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADR58167
LinkDB
All DBs
Position
546433..547632
Genome browser
AA seq
399 aa
AA seq
DB search
MKSVEEQLALIKRGAEEVLVESELVEKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQ
FQDLGHQVIFLIGDFTGMIGDPSGKSATRPPLTREQVLENAETYKQQVFKILDPAKTEVA
FNSTWMDKLTPADFIRLASQYTVARMLERDDFDKRYTTNQPIAIHEFLYPLVQGYDSVAL
KADVELGGTDQKFNLLMGRELQRSYGQEAQNIVTMPLLEGLDGVKKMSKSLGNYVGIQEA
PGVMYSKLVSIPDTLMWRYFELLSFRSMEEIEQFRADVANGANPRDIKIKLAEEIVARFH
GEEAAANAHRAAGNRMKEGELPEGLPEIEVAAAEDLPIAAVLNRAGLVKNSAQARDLLNS
GAVKVDGAVVDKDFMFVLGATHVCQAGKKSFGRVTLKAE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggttgaagagcagctggcgcttatcaagcgcggtgcggaagaagtactggtc
gagtcggaactggtggagaagctcaagcgcggccaacctctgcgcatcaaggccggcttc
gacccgaccgctccggacctgcacctgggtcacacggtgctgatcaacaagctgcgccag
ttccaggatctgggccatcaggtcatcttcctgatcggtgacttcaccggcatgatcggc
gacccgagtggcaagagcgccacgcgcccgccgcttacccgcgaacaggtgctggagaac
gccgagacgtacaagcagcaggtgttcaagattcttgacccggccaagactgaagttgcg
ttcaactccacatggatggacaagctgacccctgccgacttcattcgcctggcttcgcag
tacaccgtcgcgcgcatgctggagcgtgatgacttcgacaagcgttacaccaccaatcag
ccgattgccattcacgagttcctctatccgctggtgcaggggtacgactcggtagcgctg
aaagcggacgtcgagctgggcggtaccgaccagaagttcaacctgctgatggggcgtgaa
ctgcaacggtcttatggccaggaagcgcagaacatcgtaaccatgccactgctcgaaggg
ctcgacggcgtgaagaagatgtcgaagtcgctgggcaactatgtcggcatccaagaggcg
ccaggggtgatgtacagcaagctggtgtcgatcccggataccctgatgtggcgttacttt
gagctgctgagcttccgttcgatggaagaaatcgagcagttccgggccgatgttgcaaat
ggcgccaacccacgtgacatcaagatcaagctggcggaagaaattgtggcgcgcttccat
ggtgaggaggctgcggccaatgctcaccgtgctgccggtaaccgtatgaaggaaggcgag
ctgccggaaggcttgccggagatcgaagtggctgcggcggaagacctgccaattgctgcg
gtgctgaaccgggctggtctggtcaagaactcggcgcaggcgcgagacttgctgaatagc
ggtgcggtgaaagttgatggtgcagtggtcgacaaggacttcatgtttgtccttggtgct
acccatgtgtgccaagcgggcaagaagtcgtttggccgggttaccctcaaggctgagtga
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