KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_0850
Entry
PPUBIRD1_0850     CDS       T01975                                 
Name
(GenBank) ABC transporter related protein
  KO
K12541  ATP-binding cassette, subfamily C, bacterial LapB
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    PPUBIRD1_0850
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppb02000]
    PPUBIRD1_0850
   02044 Secretion system [BR:ppb02044]
    PPUBIRD1_0850
Transporters [BR:ppb02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    PPUBIRD1_0850
Secretion system [BR:ppb02044]
 Type I secretion system
  Adhesin protein transporter
   PPUBIRD1_0850
SSDB
Motif
Pfam: ABC_tran ABC_membrane AAA_21 SMC_N AAA_29 AAA_23 RsgA_GTPase MMR_HSR1 Dynamin_N NACHT
Other DBs
NCBI-ProteinID: ADR58535
LinkDB
Position
complement(953854..956022)
AA seq 722 aa
MSDSIDVTLPNQAPAPEQAAAHRPDLGPWLEVMLQVAHHYRLDVSPQRIRLAAAEDARPL
NEILRHMARQAGLALRFVHFDAKGLRQWRTPLVLELDDGQLAVVESVTEEDDLAVVFAGD
QGLTSRLPRDTLKGRINRVALLRPARPLRDVRTDDYTAPYDRHWFARIVLRDLRPYGQVM
VASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDL
LGKRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFF
LLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQG
LDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPM
VIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEA
RVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGG
AMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVA
ALAATGALDFVRRLPKGMDHLILEGGVGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLD
DMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALAKLQGA
QA
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgagtgattcgatcgatgtgaccctgcccaaccaggcgcccgcgccggagcaggccgcc
gcccaccggccagaccttggcccctggcttgaggtgatgttgcaggtggcacaccactac
cgcctggacgtatcaccccagcgtattcgcctggccgctgcggaggatgcccgcccgttg
aatgaaatcctccgccacatggcacgtcaggcggggctggcattgcgcttcgtgcacttc
gatgccaagggcctgcggcaatggcgcacgccgctggtgctggagctggacgatgggcag
ctggcggtggtcgagtcggtgaccgaagaggacgacctggcagtggtgttcgccggtgac
cagggcctgacttcgcgcctgccccgcgacaccctgaaaggccgtatcaaccgcgtggcc
ctgctgcgcccggcccggccactgcgcgatgtgcgcaccgacgactacaccgcgccttac
gaccgccactggttcgcccgcatcgtactgcgcgacctgcgtccctatgggcaggtgatg
gtcgcgtcactggtggccaacgtgctggcgcttgccggcgtgctgttctcgatgcaggtg
tacgaccgagtgataccggctgaatccctgcccaccctctacgtcctgttcggcggtgtg
gtgttggcactggtgttcgacttcagcatgcgcctgctgcggctaaaggtgaccgacctg
ctcggcaagcgcgccgacctgcgggtgagcgacctggtctacggccatgccctgcgcctg
cgcaactcggtgcggccgaagtccaccggctcattcatctcgcagttgcgcgagctggag
tcgatccgcgacctgatcacgtccagcaccgccacggtactggccgacctgccgttcttc
ctgctgttcctgttcgtgttctggctgatcggcggcgtactggtgttcatcccgctggtc
gcgctgctggccatggtgttacccgggttgcttgcacaacggcgcctggcacggttggcc
aatgcctcgatgcgtgagtcggcactgcgcaacgccatgctggtggaaagtatccagggc
ctggacgagatcaaggcactgcaggcagaggcacgcttcgaacgacagtggaaccagtac
aacgcggcctgcgcgcacaccaacctgcgcctgcgcaccctcaccaacggcctggtgacc
tggacgcagaacgtgcagggtgccgtgtttgccgtggtcatcgtgatcggcgcccccatg
gtcatcgccggcgacctcaccacgggtagcctggtggcggcatccatgctttcatcgcgg
atgatggcgccgctggcccagctgacccatgtgctgacccgctggcagcaggccaaggtc
gcgctgcaaggcctggacaagctgatgcagtcgccggtcgaccaccccgaaggcgaagcc
cgcgtgcacctgccggccattcacggcgagtaccgcctgcgccaggccaacttccgctac
agcgaagactacccgccagtgctgaacattggccggctggacatccagccgggcgagcgc
attgccgtgctgggccgcaacggcgccggcaaatcaaccttgctgcaggcgctgggtggg
gccatggacctggtgcagggcgagatcagcctggacggcatcgccatggcccaccttgac
cctgctgacctgcgccgtgacgtcggcctgctgccgcagtacgcgaggctgttccacggc
accctgcgggaaaacctcaccctcggcgccggccaggccagcgaccaggaactggtggcc
gcgctggccgccactggcgcactggacttcgtccgccgcctgcccaagggcatggaccac
ttgatcctcgaagggggcgtgggcttgtctggcggccagcgccaagccctggtgctgtcg
cgcctgctggtacgccagccgcaggtgctgctgctggacgaaccgaccgcgtcgctggac
gacatgaccgagcgcaagctgctggataacctggagcgcttctgtcagggccgtacattg
gtgatcgcaacccatcgactgagtgttctgcagcgggtcgaccgcatcctggtgctggac
gccgggcgcatcgtcatcgatgacgcgcgcgatgccgccctggccaaactgcaaggagcc
caggcatga

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