Pseudomonas putida BIRD-1: PPUBIRD1_0850
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Entry
PPUBIRD1_0850 CDS
T01975
Name
(GenBank) ABC transporter related protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPUBIRD1_0850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_0850
02044 Secretion system [BR:
ppb02044
]
PPUBIRD1_0850
Transporters [BR:
ppb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PPUBIRD1_0850
Secretion system [BR:
ppb02044
]
Type I secretion system
Adhesin protein transporter
PPUBIRD1_0850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
AAA_23
RsgA_GTPase
MMR_HSR1
Dynamin_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
ADR58535
LinkDB
All DBs
Position
complement(953854..956022)
Genome browser
AA seq
722 aa
AA seq
DB search
MSDSIDVTLPNQAPAPEQAAAHRPDLGPWLEVMLQVAHHYRLDVSPQRIRLAAAEDARPL
NEILRHMARQAGLALRFVHFDAKGLRQWRTPLVLELDDGQLAVVESVTEEDDLAVVFAGD
QGLTSRLPRDTLKGRINRVALLRPARPLRDVRTDDYTAPYDRHWFARIVLRDLRPYGQVM
VASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDL
LGKRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFF
LLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQG
LDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPM
VIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEA
RVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGG
AMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVA
ALAATGALDFVRRLPKGMDHLILEGGVGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLD
DMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALAKLQGA
QA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcgatcgatgtgaccctgcccaaccaggcgcccgcgccggagcaggccgcc
gcccaccggccagaccttggcccctggcttgaggtgatgttgcaggtggcacaccactac
cgcctggacgtatcaccccagcgtattcgcctggccgctgcggaggatgcccgcccgttg
aatgaaatcctccgccacatggcacgtcaggcggggctggcattgcgcttcgtgcacttc
gatgccaagggcctgcggcaatggcgcacgccgctggtgctggagctggacgatgggcag
ctggcggtggtcgagtcggtgaccgaagaggacgacctggcagtggtgttcgccggtgac
cagggcctgacttcgcgcctgccccgcgacaccctgaaaggccgtatcaaccgcgtggcc
ctgctgcgcccggcccggccactgcgcgatgtgcgcaccgacgactacaccgcgccttac
gaccgccactggttcgcccgcatcgtactgcgcgacctgcgtccctatgggcaggtgatg
gtcgcgtcactggtggccaacgtgctggcgcttgccggcgtgctgttctcgatgcaggtg
tacgaccgagtgataccggctgaatccctgcccaccctctacgtcctgttcggcggtgtg
gtgttggcactggtgttcgacttcagcatgcgcctgctgcggctaaaggtgaccgacctg
ctcggcaagcgcgccgacctgcgggtgagcgacctggtctacggccatgccctgcgcctg
cgcaactcggtgcggccgaagtccaccggctcattcatctcgcagttgcgcgagctggag
tcgatccgcgacctgatcacgtccagcaccgccacggtactggccgacctgccgttcttc
ctgctgttcctgttcgtgttctggctgatcggcggcgtactggtgttcatcccgctggtc
gcgctgctggccatggtgttacccgggttgcttgcacaacggcgcctggcacggttggcc
aatgcctcgatgcgtgagtcggcactgcgcaacgccatgctggtggaaagtatccagggc
ctggacgagatcaaggcactgcaggcagaggcacgcttcgaacgacagtggaaccagtac
aacgcggcctgcgcgcacaccaacctgcgcctgcgcaccctcaccaacggcctggtgacc
tggacgcagaacgtgcagggtgccgtgtttgccgtggtcatcgtgatcggcgcccccatg
gtcatcgccggcgacctcaccacgggtagcctggtggcggcatccatgctttcatcgcgg
atgatggcgccgctggcccagctgacccatgtgctgacccgctggcagcaggccaaggtc
gcgctgcaaggcctggacaagctgatgcagtcgccggtcgaccaccccgaaggcgaagcc
cgcgtgcacctgccggccattcacggcgagtaccgcctgcgccaggccaacttccgctac
agcgaagactacccgccagtgctgaacattggccggctggacatccagccgggcgagcgc
attgccgtgctgggccgcaacggcgccggcaaatcaaccttgctgcaggcgctgggtggg
gccatggacctggtgcagggcgagatcagcctggacggcatcgccatggcccaccttgac
cctgctgacctgcgccgtgacgtcggcctgctgccgcagtacgcgaggctgttccacggc
accctgcgggaaaacctcaccctcggcgccggccaggccagcgaccaggaactggtggcc
gcgctggccgccactggcgcactggacttcgtccgccgcctgcccaagggcatggaccac
ttgatcctcgaagggggcgtgggcttgtctggcggccagcgccaagccctggtgctgtcg
cgcctgctggtacgccagccgcaggtgctgctgctggacgaaccgaccgcgtcgctggac
gacatgaccgagcgcaagctgctggataacctggagcgcttctgtcagggccgtacattg
gtgatcgcaacccatcgactgagtgttctgcagcgggtcgaccgcatcctggtgctggac
gccgggcgcatcgtcatcgatgacgcgcgcgatgccgccctggccaaactgcaaggagcc
caggcatga
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