Pseudomonas putida BIRD-1: PPUBIRD1_0933
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Entry
PPUBIRD1_0933 CDS
T01975
Name
(GenBank) Extracellular solute-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02010
ABC transporters
ppb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPUBIRD1_0933
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPUBIRD1_0933
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_0933
Transporters [BR:
ppb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PPUBIRD1_0933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ADR58617
LinkDB
All DBs
Position
complement(1062830..1064413)
Genome browser
AA seq
527 aa
AA seq
DB search
MLRLTLAALILGGATHLAAKPLVVCTEASPEGFDVVQYTTGVTFDASSETLFNRLVDFKP
GTTDIQPALAERWDISADGLTYTFHLRQGVKFHSTEYFTPTREFNADDVLWSLRRQLDPA
HPWHDKTSVGYPYFESMAFKQLLKSVDKTDDHTVVITLTRPEAPFLRDMAMGFTSIYSAE
YGDQLLKAGKTAALNSKPIGTGPFIFQRYNKDAQVRFKPNPDYFRGKPPADALIFAIATD
SNVRLQKLRANECQVALYPKPEDVPSIKADARLKVAETEALVTGYIAMNTQHKYLNDVRV
RKAINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLRQAGV
PEGTVITLFTRNGGGMTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKQGEADL
VSTGWAGDNGDPDNFLGPLLSCEAAKNGENYARWCNSKFQELITRAREVIDNDERARLYS
EALKVYDDDQPWISMAHPKVFTAMRDNVEGYVISPLTNNNFATTKVK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccttaccctggcagcgctgatactgggcggcgccacgcatctggccgccaag
ccgctggtggtgtgtaccgaagccagcccggaagggttcgacgttgttcagtacaccact
ggggtcactttcgatgcctcgtccgaaaccctgttcaaccgcctggtcgacttcaagccc
ggcaccaccgatatccagccggccctggccgagcgttgggacatttcagccgacggcctg
acctacacgtttcacctgcgccagggggtgaagttccatagcaccgagtacttcacccct
acccgtgaattcaacgccgacgacgtgctgtggagcctgcgccgccagctcgaccccgcc
catccatggcacgacaagaccagcgtcggctacccgtacttcgaaagcatggccttcaag
cagttgctcaagtcggtggacaaaaccgacgaccacacggtggtgatcactctcacccgc
ccggaagcgccgttcctgcgggacatggcgatggggttcacctcgatctactccgccgaa
tacggcgaccagttgctcaaggccggcaagaccgcagcgctgaacagcaagccgatcggc
accggcccgttcatcttccagcgctacaacaaggatgcgcaggtccgcttcaaacctaac
ccggattactttcgcggcaagccgccagccgacgccctgatattcgccatcgctaccgat
agcaacgtacgcctgcagaaactgcgcgccaacgagtgccaggtggcgttgtaccccaaa
cccgaggatgtgccgtcgataaaggccgacgccaggctcaaggtcgcagagaccgaagcg
ttggtcaccggctacatcgccatgaatacccagcacaaatacctcaacgacgtgcgcgtg
cgtaaagccatcaacatggccttcgaccgccagacccatgtcgaccaactgtttggcaaa
ggcaacgcactggtgggtgtaaacccttacccacccaccatgatcggctacaacacccac
aaccagaacccaccgcgcgacctcgataaagcccgcgccctgctcaggcaggccggtgta
cccgagggcacggtaatcaccctgttcacccgcaacggcggcggcatgacgaaccctaac
ccgcgcctgtccgccgaaatgctgcaagccgacctcaagcagatcggcctgaagctggat
attcgcgtgatggaatgggccgagatgctgcgccgcgccaagcagggcgaagccgacctg
gtgtccaccggctgggcaggcgacaacggcgacccggacaatttccttggcccgctgctc
agttgcgaggccgccaaaaacggtgagaactacgcgcgctggtgcaactcgaaattccag
gagctgatcacccgtgcccgcgaggtgatcgacaacgacgagcgcgcaaggctctatagc
gaggcattgaaggtgtacgatgacgaccaaccctggatcagcatggcccaccccaaggtg
ttcacggccatgcgtgacaacgtggagggctacgtgatcagccctctgaccaacaataac
ttcgccacgaccaaggtgaagtag
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