Pseudomonas putida BIRD-1: PPUBIRD1_0935
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Entry
PPUBIRD1_0935 CDS
T01975
Name
(GenBank) Extracellular solute-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02010
ABC transporters
ppb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPUBIRD1_0935
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPUBIRD1_0935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_0935
Transporters [BR:
ppb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PPUBIRD1_0935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ADR58619
LinkDB
All DBs
Position
complement(1066127..1067719)
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AA seq
530 aa
AA seq
DB search
MRHAKRLSTLLALGLISQSPVLLANNLVFCSEGSPAGFDTAQYTSATDNDAAEPIYNRLV
EFERGGTAVHPALATRWEVSDDGLRYTFHLREGVKFHSNKAFSPSRTFNADDVLFTFNRM
LDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASI
LSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVF
SINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHPPF
DRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQLLQ
QAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMKNG
EHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQRTA
LYQQAQQRLKQQVPITPVAHSTVSQPLSVKVSQFKVSPFGRNDFSGVSVD
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacgccaaacgcctttcgaccctgctggccctgggcctgatcagccaatccccg
gtcctgctcgccaacaacctggtgttctgctctgaaggtagccccgccggtttcgacacc
gcccagtacaccagcgccaccgacaacgacgccgccgaacccatctacaaccgcctggtc
gagttcgaacgtggcggcaccgccgtgcacccggccctggcgacgcgctgggaggtgtcc
gacgacggcctgcgctacaccttccacctgcgtgaaggggtcaagttccacagcaacaag
gccttcagcccgagccgcacgttcaatgccgacgatgtgctgttcaccttcaaccgcatg
ctcgacaagggtcatcggttccgtcaggcctaccctaccgagtttccctatttcaacggc
atgggcctggacaagaacatcgcccgcgtcgagaagaccgacccattgaccgtggtgttc
accctgaacaccgtcgatgccgcgttcatccagaacctggccatgagcttcgcctccatc
ctctccgctgaatacgccgagcagctactggccagtggacgccccagcgacatcaatcag
cagcctatcggtaccgggccattcgtgttccagcgctaccagaaggattcgcagatccgc
tacaagggcaacaaggactattgggcagcgaacgaggtgaagatcgacaacctggtgttc
tcgatcaataccgacccctcggtgcgcatccagaagctgcgccgcaacgaatgccaggtc
accctgcacccacgcccggccgacctgccggcgctcaaggccgacagcacgctgcaggtg
ctccagcaaccaggcttcaacctcggctacatcgcctacaacacccagcacccgccattc
gaccgcctggaagtgcgccaggcaatggacatggcggtcaacaaggaagccatcctccag
gcggtgtaccaggacgccggccaacgggcggtcaacgccatgccaccgacccagtggtcc
tatgacgacagcatcaaggacgccccgtacgcgccggaaaaggccagacagctgcttcag
caggcgggtgtcaaacctggcaccgagatcaccctgtgggccatgccggtgcaacgcccg
tacaaccccaatgccaagctgatggccgaaatgctccaggccgactggagcaagctcggt
ttcaaggtgcgcatcgtcagctacgaatggggcgaatacctcaagcgcatgaaaaacggt
gagcacgacatcgccctgatcggctggaccggtgacaacggcgacccggacaactggctc
ggcaccctctacagctgcgatgccatcggcagcaacaactactcgcagtggtgcgatccg
cagtacgacagcctggtcaagcaggccaagcaagtgaccgaccgtacgcaacgcaccgcc
ctgtaccagcaggcccagcagcggctaaagcagcaggtaccgattacgccggtggcgcat
tccaccgtgagccagccgcttagcgtcaaggtttcccagttcaaggtcagcccgtttggg
cgcaatgatttttccggtgtgagtgttgattaa
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