Pseudomonas putida BIRD-1: PPUBIRD1_1116
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Entry
PPUBIRD1_1116 CDS
T01975
Name
(GenBank) Two component, sigma54 specific, transcriptional regulator, Fis family
KO
K17061
two-component system, response regulator AauR
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPUBIRD1_1116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppb02022
]
PPUBIRD1_1116
Two-component system [BR:
ppb02022
]
Other families
AauS-AauR (acidic amino acids utilization)
PPUBIRD1_1116
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_50
AAA_2
AAA
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ADR58798
LinkDB
All DBs
Position
complement(1261732..1263060)
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AA seq
442 aa
AA seq
DB search
MNQAPLTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLP
GIDGLELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRA
LEQRGLSREVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTG
KELVARCLHDFSRRQSHPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANG
GTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSGQF
RSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAHDW
PGNVRELRNVAERYALGLPAFKKGPSGGANQGLLFAEAVEAFERNLLTDALQRTGGNLSQ
ASQELGMAKTTLFDKVKKYGLA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcgcctcttaccgtcctgatcgtcgaagacgacccgcatgtgctgctcggc
tgccagcaggcgctggccctggaggatatcgcctgcgagggcgtaggcagcgccgaacag
gcgctggaacgcatcggcgacgatttcgccggcattgtcgtcagcgatatccgcttgccg
ggtattgatggcctggagctgctcaatcgcctcaaggcccgtgaccgcagcctgccggtg
gtactgatcactggccatggcgatatcgacatggccgtcggcgccatgcgtaacggcgcc
tacgacttcatggaaaaaccgttctcccccgagcgcctggtcgatgtggtacgccgcgcg
ctggaacagcgcgggctgtcacgcgaagtggtggccctgcgccgccagctggccgaacag
agcagcctggagggacgcatcattggtcgctcaccggccatggagcacttgcgcgaactg
atcgccaacgtcgccgacacctcagccaacgtgctgatcgaaggcgagaccggcaccggc
aaagagctggtcgcacggtgcctgcacgacttcagccgacgccagagccacccgttcgtg
gcgctgaactgtggcggcctgccggaaaacctgtttgaaagcgagatattcggccacgaa
gccaacgccttcaccggtgccggcaaacgccgcatcggcaagatcgaacacgccaatggc
ggcacgctgttcctcgatgaagtggagagcatgccgatcaacctgcagatcaagctgctg
cgtgtgctgcaggagcgcaccttggagcgattgggctcgaaccagagcatcccggtggat
tgccgggtgatcgccgcgacaaaggccgacctcgatgccttgggccagagcggccagttc
cgcagcgacctgtattaccggctgaacgtggtcaccctggagctgccgccgctgcgtgag
cgccgtgaagacatcctgcagttgttcgaacattttctgcagcagtcggccctgcgcttc
gaccgcgaaacaccgacactggacagccagaccctgtcgcgcctgatggcccatgactgg
ccgggtaacgtgcgcgagttgcgtaacgtggccgagcgctatgctctcggcctgccagcg
ttcaagaaaggccccagcggtggtgccaaccaaggcctgctttttgccgaggcggtggaa
gcattcgaacgcaacctgctcactgatgccctgcaacgcacgggtggcaacctgagccag
gccagccaggagctgggcatggccaagaccacgctgttcgacaaagtgaaaaaatacggc
ctcgcctga
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