Pseudomonas putida BIRD-1: PPUBIRD1_1349
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Entry
PPUBIRD1_1349 CDS
T01975
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00061
Fatty acid biosynthesis
ppb00071
Fatty acid degradation
ppb01100
Metabolic pathways
ppb01212
Fatty acid metabolism
ppb02024
Quorum sensing
ppb04146
Peroxisome
Module
ppb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PPUBIRD1_1349
00071 Fatty acid degradation
PPUBIRD1_1349
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PPUBIRD1_1349
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPUBIRD1_1349
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppb01004
]
PPUBIRD1_1349
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppb04147
]
PPUBIRD1_1349
Enzymes [BR:
ppb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PPUBIRD1_1349
Lipid biosynthesis proteins [BR:
ppb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PPUBIRD1_1349
Exosome [BR:
ppb04147
]
Exosomal proteins
Exosomal proteins of breast milk
PPUBIRD1_1349
Exosomal proteins of breast cancer cells
PPUBIRD1_1349
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
ADR59027
LinkDB
All DBs
Position
1509521..1511218
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AA seq
565 aa
AA seq
DB search
MIENFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTKVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPQAVRFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCVKGPQVMKGYWQ
REDATAEILDSEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRHIEFRDSLPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaatttttggaaggataagtacccagccgggattacggcggaaatcaatcct
gacgaattccccaatatccaggcagtactcaagcaatcctgccaacgctttgccgacaaa
ccggcctttagcaacctgggcaagactatcacttatggcgagttgtatgcgttgtcgggg
gcgtttgccgcctggctgcagcagcataccgacctcaagccgggtgaccgcattgccgtg
caactgcccaatgtcctgcaatacccggtcgcggtcttcggtgccatgcgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccagttcaacgac
tcgggtgccaaggccctggtgtgcctggccaacatggcccacctggccgagaaagtggtg
cccaaaaccaaggtcaggcacgttatcgtcactgaagtggccgacctgctgccgccactc
aagcgcctgctgatcaacagcgtgatcaagtacgtgaagaagatggtgccggcctacaac
ctgccacaggctgtgcgtttcaatgacgccctggcgctgggcaagggccagccagtgacc
gaagccaacccgcaggccaacgacgtggcggtgctgcagtacaccggcggtaccaccggt
gtggccaaaggcgccatgctgacccaccgcaacctggtggccaacatgctgcagtgccgg
gcactgatgggctccaacctgcacgaaggctgcgaaatcctcatcaccccgctgccgctg
taccacatctatgcgtttaccttccattgcatggcgatgatgctgatcggcaaccacaac
gtgctgatcagcaacccgcgagacttgccggcgatggtcaaggaactgggcaagtggaag
ttcagcggctttgtgggcctcaacaccctgttcgttgccctgtgcaataacgaggcgttc
cgagccctggatttctcggcgctgaaaatcaccctgtcgggcggcatggccttgcagcta
agcgtggccgagcgctggaaggccgttaccggttgcgccatctgcgaaggctacggcatg
accgaaaccagcccggtggcggcggtgaacccgtcggaagcgaaccaggtgggcaccatc
ggtattccggtgccgtcgaccctgtgcaaggtcatcgacgatgccggcaatgagctgccg
cttggcgaagtgggcgagctgtgtgtcaagggcccgcaggtgatgaagggctactggcag
cgtgaagacgccacggccgagattctcgacagcgaaggctggctgaagaccggtgacatc
gccgtgatccaggcggacggctacatgcgcatcgtcgaccgcaagaaagacatgatcctg
gtctcgggcttcaacgtgtaccccaacgagctggaagacgtgttggcggccttgccgggc
gtgctgcagtgcgcagccatcggtgtgccggacgagaagtcgggtgaagtgatcaaggtc
ttcatcgtggtcaagccgggcatgaccgtgaccaaggagcaggtgatggagcacatgcgc
gccaacgttaccggctacaaggtaccgcgccacatcgagttccgcgattcgctgcctacc
accaacgtgggcaagatcctgcgccgcgaactgcgtgatgaagagctcaagaagcaaggc
ttgaagaagatcgcctga
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