Pseudomonas putida BIRD-1: PPUBIRD1_1559
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Entry
PPUBIRD1_1559 CDS
T01975
Symbol
gcl
Name
(GenBank) Gcl
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00630
Glyoxylate and dicarboxylate metabolism
ppb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PPUBIRD1_1559 (gcl)
Enzymes [BR:
ppb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
PPUBIRD1_1559 (gcl)
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Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
ADR59229
LinkDB
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Position
complement(1735012..1736787)
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AA seq
591 aa
AA seq
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MSKMRAIDAAVLVMRREGVDTAFGIPGAAINPLYSALKKVGGIDHVLARHVEGASHMAEG
YTRANPGNIGVCIGTSGPAGTDMVTGLYSASADSIPILCITGQAPRARLHKEDFQAVDIT
NIVKPVTKWATTVLEPGQVPYAFQKAFYEMRTGRPGPVLIDLPFDVQMAEIEFDIDAYEP
LPVHKPSATRVQAEKALALLNDAERPLLVAGGGIINADASDKLVEFAELTGVPVIPTLMG
WGTIPDDHAQMVGMVGLQTSHRYGNATLLKSDLVFGIGNRWANRHTGSVDVYTEGRKFVH
VDIEPTQIGRVFTPDLGIVSDAGKALDVFLEVAREWKAAGKLKCRKAWLEECQERKSSLQ
RKTHFDNVPVKPQRVYEEMNQVFGKDTCYVSTIGLSQIAGAQFLHVYKPRHWINCGQAGP
LGWTIPAALGVVKADPKRKVVALSGDYDFQFMIEELAVGAQFNLPYVHVLVNNAYLGLIR
QAQRGFDMDYCVQLAFENINSTDAATYGVDHVAVVEGLGCKAIRVFEPAEIAPALLKAQK
MAEEFRVPVVVEVILERVTNISMGTEINAVNEFEDLALVGNDAPTAISLLD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatgagagcaatcgatgcagccgttctggtcatgcgccgtgaaggtgtagat
accgcgttcggcatcccgggggctgccatcaacccgttgtattcggccctgaagaaagtc
ggtggcatcgatcacgtcctcgctcgtcacgtcgaaggtgcctcgcacatggccgagggc
tacacccgcgccaacccgggcaacatcggtgtgtgcatcggcacttccggccctgccggc
accgacatggtcaccggcctgtacagtgcctcggccgactccatcccgattctgtgcatc
actggccaggcgccccgtgcgcgcctgcacaaggaagacttccaggccgtcgacatcacc
aacatcgtcaagccagtgaccaagtgggcgaccaccgttctggagccaggccaggtgcct
tacgccttccagaaggccttctatgaaatgcgtaccggccgcccaggcccggtgctgatc
gacctgcctttcgacgtgcagatggccgaaatcgaattcgacatcgacgcctacgaaccg
ctgcccgtgcacaaaccgtccgccacacgcgtacaggccgaaaaagccctggccctgctc
aatgacgccgagcgcccactgctggtagccggtggcggcatcatcaacgccgacgccagc
gacaagctggtcgaattcgccgaactgaccggcgtacccgtgatcccgaccctgatgggc
tggggcaccatcccggacgaccacgcacagatggtcggcatggtcggcctgcagacctcg
caccgctatggcaacgcaaccctgctgaaatccgacctggtattcggtatcggtaaccgc
tgggccaaccgccacaccggttccgtcgatgtctacaccgaaggccgcaagttcgtacac
gtcgacatcgaaccgacccagatcggccgcgtgttcaccccggacctgggcatcgtttcc
gatgccggcaaggcactggacgtgttcctggaagtggcccgcgagtggaaagccgccggc
aagctcaagtgccgcaaggcctggctggaagagtgccaggagcgcaagtcgagcctgcag
cgcaagacccacttcgacaacgtgccggtcaagccgcagcgcgtctacgaagaaatgaac
caggtattcggcaaagacacctgctacgtcagcaccatcggcctgtcgcagattgccggc
gcgcagttcctgcatgtgtacaagcctcgccactggatcaactgcggccaggccggcccg
ctgggctggaccatccctgctgcgctgggcgtggtgaaagccgatccgaagcgcaaggtt
gtggcgctgtcaggtgactacgacttccagttcatgatcgaagaactggcggtaggcgca
cagttcaacctgccgtacgtccacgtactggtgaacaacgcctacctgggcctgatccgc
caggcgcagcgtggcttcgacatggattactgtgtacaactggcgttcgagaacatcaac
tcgaccgacgctgccacctacggtgtcgaccacgtcgccgtggtcgaaggcctgggttgc
aaggccatccgtgtgttcgagccagcagaaatcgcccctgccctgctcaaggcacagaag
atggccgaagagttccgcgtgccggtggtggttgaagtgattctcgagcgtgtgaccaac
atttccatgggcaccgagatcaacgcggtcaacgagttcgaagacctggccctggtcggc
aacgacgcgccaaccgccatctcgctgctggactga
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