Pseudomonas putida BIRD-1: PPUBIRD1_1665 Help Entry PPUBIRD1_1665     CDS       T01975                                  Symbol lpdG Name (GenBank) LpdG   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism ppb  Pseudomonas putida BIRD-1 Pathway ppb00010   Glycolysis / Gluconeogenesis ppb00020   Citrate cycle (TCA cycle) ppb00260   Glycine, serine and threonine metabolism ppb00280   Valine, leucine and isoleucine degradation ppb00310   Lysine degradation ppb00380   Tryptophan metabolism ppb00620   Pyruvate metabolism ppb00630   Glyoxylate and dicarboxylate metabolism ppb00640   Propanoate metabolism ppb00670   One carbon pool by folate ppb00785   Lipoic acid metabolism ppb01100   Metabolic pathways ppb01110   Biosynthesis of secondary metabolites ppb01120   Microbial metabolism in diverse environments ppb01200   Carbon metabolism ppb01210   2-Oxocarboxylic acid metabolism ppb01240   Biosynthesis of cofactors Module ppb_M00009   Citrate cycle (TCA cycle, Krebs cycle) ppb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate ppb_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA ppb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA ppb_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:ppb00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     PPUBIRD1_1665 (lpdG)    00020 Citrate cycle (TCA cycle)     PPUBIRD1_1665 (lpdG)    00620 Pyruvate metabolism     PPUBIRD1_1665 (lpdG)    00630 Glyoxylate and dicarboxylate metabolism     PPUBIRD1_1665 (lpdG)    00640 Propanoate metabolism     PPUBIRD1_1665 (lpdG)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     PPUBIRD1_1665 (lpdG)    00280 Valine, leucine and isoleucine degradation     PPUBIRD1_1665 (lpdG)    00310 Lysine degradation     PPUBIRD1_1665 (lpdG)    00380 Tryptophan metabolism     PPUBIRD1_1665 (lpdG)   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     PPUBIRD1_1665 (lpdG)    00670 One carbon pool by folate     PPUBIRD1_1665 (lpdG)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ppb04147]     PPUBIRD1_1665 (lpdG) Enzymes [BR:ppb01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      PPUBIRD1_1665 (lpdG) Exosome [BR:ppb04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    PPUBIRD1_1665 (lpdG) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like GIDA NAD_binding_8 FAD_binding_3 3HCDH_N Thi4 DAO AlaDh_PNT_C Lys_Orn_oxgnase 2-Hacid_dh_C Lycopene_cycl Amino_oxidase UDPG_MGDP_dh_N DUF3373 Motif Other DBs NCBI-ProteinID:  ADR59333 LinkDB All DBs Position 1888231..1889667 Genome browser AA seq 478 aa AA seqDB search MTQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKAL LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG HGKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAV PKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIK LGARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLASDSGVTIDERGY IFVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI GPSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKKR NT seq 1437 nt NT seq  +upstreamnt  +downstreamnt atgacccagaaattcgacgtagtggtaatcggtgcaggcccaggcggctatgtggctgcc atcaaggctgcccaacttggtctgaagactgcctgtatcgagaagtacaccgacgccgag ggcaaactggccctgggcggcacctgcctgaacgtaggttgcattccttccaaggcgctg ttggacagctcctggaagtacaaggaagccaaagagagcttcaacgtccacggtatctcc actggcgaagtgaagatggacgtcgccgcgatggttggccgcaaggccggtatcgtcaag aacctgaccggtggcgttgccaccctgttcaaggccaacggcgtcacttcgatccagggc cacggcaagctgctggccggcaagaaagtcgaagtcaccaaggctgacggcaccaccgaa gtcatcgaagccgagaacgtgatcctggcttccggctcgcgcccgatcgacattccgccg gccccggtcgaccagaacgtcatcgtcgactccaccggcgccctggaattccaggccgta ccgaagcgcctgggcgttatcggtgcaggcgtgatcggcctggagctgggctcggtatgg gctcgcctgggtgctgaagtgaccgtccttgaagccctggacaccttcctgatggctgcc gacaccgccgtgtcgaaagaagcccagaagaccctgaccaagcaaggcctggacatcaag ctgggcgctcgcgtcaccggctcgaaagtcaacggcaatgaagtcgaagtgacctacacc aacgccgaaggcgagcagaagatcaccttcgacaagctgattgttgcagtcggccgtcgc ccggtgactaccgatctgctggcttccgacagcggcgtgaccatcgacgagcgtggctac atcttcgtcgacgattactgcgccaccagcgttccgggcgtgtacgccattggtgacgtg gtacgcggcatgatgctggcccacaaggcttcggaagagggcatcatggtcgtcgagcgc atcaagggccacaaggcccagatgaactacgacctgatcccttcggtcatctacacccac ccggaaatcgcgtgggtcggcaagaccgaacaggccttgaaggccgagggcgttgaggtt aacgtgggcaccttcccgttcgcggccagcggccgtgcgatggctgccaacgacaccggt ggtttcgtcaaggtcatcgccgatgccaagaccgaccgcgttctgggtgttcacgtgatt ggcccatcggctgccgaactggtgcagcagggcgcaatcgcaatggaattcggcaccagt gccgaggatctgggcatgatggtcttcagccatccaaccctgtccgaagcgttgcatgaa gcagcgctggcggtgaatggcggcgccattcacgtggccaaccgtaagaagcgttaa

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