Pseudomonas putida BIRD-1: PPUBIRD1_1681
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Entry
PPUBIRD1_1681 CDS
T01975
Name
(GenBank) TonB-dependent receptor, plug
KO
K02014
iron complex outermembrane recepter protein
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_1681
Transporters [BR:
ppb02000
]
Other transporters
Pores ion channels [TC:
1
]
PPUBIRD1_1681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF481
Motif
Other DBs
NCBI-ProteinID:
ADR59348
LinkDB
All DBs
Position
complement(1905855..1907969)
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AA seq
704 aa
AA seq
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MFPGTPPYPRLLLLTALLGGQAVADDLFIDNTDLPQVLTATRLKQSPAAVPGSMTVLDSE
LIRASGARDIPELLRLVPGMMIGYGAGNQPTVNYHGSNVNDARRMQVLIDGRSVYRAGLA
TVDWSDIPLAMEDIERIEVFRGPNTVSYGANALMAVVNILTRKPADSHGTRLKVTRGQDG
INDFYASHGLGWDGGDLRLSLSGQQDDGFDENQFGQDYRDSRRLTRFNLSANHNLAVDQT
LEWQLAAKEGSNQRPYTYQPVFQQYESGNNADVNAKDYAGSLRWTKDFSAEHSLYIQGSA
QHFDRQQVWRACDALQSFSPELTQLWQMNPDFAEKVARGIATGAPLSTDDPALEGLLQKV
QQQWEQGGREQVCGDVDQSTRETRYDLEIQDTLSLTDSLRLLSGMNYRYDRADSQTYFNG
SIDDQTWRLFGQLEWRADEHWILQGGAMFEDSRLSGSSLTPRVAVNYLITPRHGLRAVYS
EAVRSPDMFENNVNWSYTVKNLTPNSFGLQNGEYFVKTRGPGDLEQERMRSRELGYNGYF
SDLDLSLDVKLFYDEITGMISEPLRNNQYIASNANKARFSGSEAQMDWRPTLRDRLRLTY
AYVDAWASNPDDRRLSARNSGSAGWMREWGSGWSSALFYYGDDALNQYRYERLDLRLAKR
FRVYGSNLELAALWQQRLDDEPTSALQNRYDSRHRLSVSAELEF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgttccctggcacgcccccgtacccgcgcctgctgttattgaccgccctgctcggcggt
caggccgtggccgacgacctgttcatcgacaacaccgacctgccacaggttctgaccgcc
acacgcctgaaacaatcccccgccgctgtcccgggcagcatgaccgtactcgacagcgaa
ctgattcgcgccagcggtgcccgtgacatccccgaactgctgcgcctggtaccgggcatg
atgatcggctacggtgccggtaatcaacccacggtcaactaccacggcagcaacgtcaac
gacgcacggcgcatgcaggtattgatcgatggccgctcggtataccgcgcaggcctggcc
acggtggactggagcgacatccccttggccatggaggatatcgagcgcatcgaggtgttc
cgcggcccgaataccgtcagctatggcgccaacgcgctgatggcggtggtcaacatcctc
acccgcaaacccgccgacagccacggtacgcggctgaaagtgacacgcggccaggacggc
atcaacgacttctatgccagccacggcttgggttgggacggtggcgacctgcgcctgtcg
ctgtcgggccaacaggacgacggcttcgatgagaaccagttcggccaggactaccgcgac
agccgccgcctgactcgcttcaacctcagcgccaaccacaacctggcggtcgaccagacc
ctggagtggcaactggcggccaaggaaggcagcaatcagcggccctacacctaccagccg
gtgttccagcagtacgagtccgggaacaatgccgacgtcaacgccaaggactatgcgggc
tcgttgcgctggaccaaagacttcagcgctgaacacagcctttatatccagggttccgcc
cagcattttgatcgccagcaagtgtggcgcgcctgtgatgccttgcagtcgttcagcccc
gaactgacccagctctggcagatgaaccccgacttcgccgagaaagtggcgcgcggcatt
gcgactggcgcccccctttccactgacgaccctgcccttgaagggcttctgcagaaagtg
cagcagcaatgggagcagggaggacgggagcaggtctgcggcgatgtcgatcagagcacc
cgtgaaacccgctatgacctggaaatccaggacaccctgagcctgaccgacagcctgcgt
ctgctcagtggcatgaactaccgctatgatcgcgccgactcgcagacctacttcaacggc
agcatcgacgaccagacctggcgcctgttcggccagctggaatggcgcgccgacgagcac
tggatactgcaaggtggggccatgttcgaagactcgcgcctgtctggcagttcgctgacc
ccgcgcgtcgcggtcaactacctgatcaccccgcgccacggcctgcgtgcggtgtactcc
gaagcggtgcgctcgcccgacatgttcgagaacaacgtcaactggagttacacggtcaag
aacctcacccccaattcattcgggctgcaaaacggtgagtatttcgtcaagacccgtggc
cctggcgaccttgaacaggagcgcatgcgctcgcgcgagctaggctacaacggctatttc
agcgacctcgacctaagcctggatgtgaagctgttctacgacgagatcaccggcatgatc
agcgagcctctgaggaacaaccagtacatcgccagcaacgccaacaaggcccgtttcagc
ggcagcgaggcgcaaatggactggcgccccaccctgcgcgaccgcctgcgcctgacctat
gcctacgtcgatgcgtgggccagcaaccccgacgaccgtcgcctcagcgcccgtaacagc
ggctcggccgggtggatgcgcgaatggggttccggctggtcgagcgcgctgttctactac
ggcgacgatgccctcaaccagtaccgctacgagcgtcttgacctgcgcctggccaagcgc
tttcgggtgtatggcagcaacctggagctggcggcgctgtggcagcagcgcctggacgat
gaaccgacctcggccctgcagaaccgctacgacagccgtcaccgcctgagcgtgagcgcg
gagctggagttctga
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