Pseudomonas putida BIRD-1: PPUBIRD1_1757
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Entry
PPUBIRD1_1757 CDS
T01975
Name
(GenBank) Carbamoyl-phosphate synthase L chain, ATP-binding protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00280
Valine, leucine and isoleucine degradation
ppb01100
Metabolic pathways
Module
ppb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PPUBIRD1_1757
Enzymes [BR:
ppb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
PPUBIRD1_1757
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
BT_MCC_alpha
HlyD_3
GARS_A
ATP-grasp_3
ATP-grasp_5
ATPgrasp_ST
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ADR59423
LinkDB
All DBs
Position
complement(1991293..1993245)
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AA seq
650 aa
AA seq
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MSRPALTTLLVANRGEIACRVMRTAKAMGLTTVAVHSATDRDARHSREADIRVDLGGTKA
AESYLLIDKLLAAAKASGAQAIHPGYGFLSENAGFARAIEQAGLIFLGPPASAIDAMGSK
SAAKALMEAAGVPLVPGYHGEAQDLDTFRAAAERIGYPVLLKASAGGGGKGMKVVEEESQ
LADALASAQREAQSSFGDARMLVEKYVLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ
KVVEEAPAPGLSPELRRAMGEAAVRAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVE
HPVTEAITGLDLVAWQIRVACGEALPITQEQVPLIGHAIEVRLYAEDPANDFLPATGKLA
LYRESAPGEGRRVDSGVSEGDVVSPFYDPMLGKLIAWGEDREQARLRLLAMLDEFAIGGL
KTNIAFLRRILAHPAFAAAELDTGFIPRHQQVLLPAPQALPAAFWEAAAEAWLQGQGAHQ
REDDRHSPWGERNGLRLGLPARSSLHLVSAGQDQAVALERSAASTWQLQGEQLVHDQNGV
RRQHLAIRRGGTLYLHWDGEMHAIEAFDPIAEAEASHSHQGGLGAPMNGSIVRVLVEPGQ
VVEAGTALVVLEAMKMEHSIRAPHAGTVKALFCLEGDMVSEGTVLVELVE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccccgctttgaccaccctgctggtcgccaaccgcggcgaaatcgcctgccgg
gtgatgcgcaccgccaaggccatgggcctgaccactgttgccgtgcacagcgccaccgac
cgtgacgcccggcatagccgcgaagctgatatccgcgtggatctcggtggcaccaaggcc
gccgaaagctacctgctgatcgacaagctgctggcagcagccaaggccagcggtgcccag
gccattcacccaggttatggtttcttgtccgagaacgcaggtttcgcccgcgccatcgag
caggccgggctgatattcctcggcccaccggccagcgccatcgacgccatgggcagcaaa
tcggcagccaaggcgctcatggaggcagccggcgtgccgttggttccgggctaccatggc
gaggcccaggacctggacacgttccgcgccgcggccgaacgcatcggctacccggtgctg
ctcaaggccagcgctggcggcggtggcaagggcatgaaagtggtcgaggaagaaagccag
ttggccgacgccctggcctcggcccagcgtgaggcacagtcgtcgttcggcgatgcgcgc
atgctggtggaaaagtacgtgctcaagccgcgccatgtcgaaatccaggtgtttgccgac
cagcacggcaactgcctgtaccttaacgaacgcgactgttccattcagcgccgccatcag
aaggtggtggaagaggcccctgcccccggcctgtcgcccgaactgcgccgggccatgggc
gaagcggcggtgcgtgccgcccaggctatcggttacgtgggtgccggcaccgtggagttt
ctgcttgatgcacgtggcgagttcttcttcatggagatgaacacccgcctgcaggtggaa
cacccggtcactgaggccataaccggcctggaccttgttgcctggcaaattcgcgtggcc
tgtggcgaagccctgccgatcacacaggaacaggtgccgctgatcggccatgccatcgaa
gtacgcttgtatgccgaagacccggccaatgattttttacccgcgaccggcaaattggcg
ctgtaccgtgaatcggcgcctggcgaaggccggcgggtggacagcggggtcagcgaaggc
gatgtggtgtcgccgttctacgacccgatgctgggcaagctgattgcctggggcgaagac
cgcgagcaggcgcgcttgcgcttgctggccatgctcgatgagttcgccattggcgggctg
aagaccaacattgccttcctgcggcgcattctcgcccacccggcatttgctgcggcggag
ctggataccggcttcattccgcgtcatcagcaggttctgctgcctgcgccgcaagcattg
ccggcagccttctgggaagcagcggcggaggcgtggctgcagggccagggggcacatcag
cgcgaagacgaccgtcattcgccttggggcgagcgtaacggcctgcgcttgggcctgccg
gcacgcagcagcttgcatctggtgagcgccgggcaagatcaggcagtggccctggaacgc
agcgctgcttctacctggcagttgcaaggtgagcagttggtgcatgaccagaacggtgtg
cgtcgccagcacctggcaatccgtcggggtggcacgctgtacctgcactgggatggcgaa
atgcatgccatcgaagccttcgacccgattgccgaggccgaagccagccacagccaccag
ggcgggctgggtgcgcccatgaacggcagtatcgtgcgggtgctggtcgaacctggtcag
gtggtggaagccggtactgcgctggtggtattggaggccatgaagatggagcacagcatt
cgtgcgccgcatgccggcacggtgaaggcgctgttctgcctggagggggatatggtcagc
gaagggactgtgctggtcgaactggtggaataa
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