Pseudomonas putida BIRD-1: PPUBIRD1_2455
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Entry
PPUBIRD1_2455 CDS
T01975
Name
(GenBank) Oxidoreductase, large subunit, putative
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00230
Purine metabolism
ppb01100
Metabolic pathways
ppb01120
Microbial metabolism in diverse environments
ppb01232
Nucleotide metabolism
Module
ppb_M00958
Adenine ribonucleotide degradation, AMP => Urate
ppb_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PPUBIRD1_2455
Enzymes [BR:
ppb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
PPUBIRD1_2455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADR60083
LinkDB
All DBs
Position
complement(2797403..2799601)
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AA seq
732 aa
AA seq
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MIKPTPVAGTSLDRVDGVAKVTGQARYAGEYPEVGLLHGSVVSSTIARGRVLNIDSTQAM
RVPGVIAVLDHGHRPHISSYDDDYSDADAAHGAPFRPLFDDRVLYNGQPLALVVAHTLEL
ARYAGSLIRIEYAEEAHQTDLGACQQSHAAPAKTPAPRGDFAAQFAGAPVQVDATYLTAN
EYHNPMEPHASTVLYKGDGTLEIHDKTQGTQNCQDYLHKVFGLPKANIRVRAAFVGGAFG
SGLRPQYQLPLAVMAALHLQRSVRVTLTRQQMFTFGYRPRTEQRLRLGADANGQLLAIAH
DALGQTSRFEDFTEHVVEWSGMLYQCDNVALSYRLASLDVYTPLDMRAPGAASGMIALEC
AMDELACAAQIDPLDLRRRNFAASNANEGKPYSSKELLACYRQGAERFGWQNRNPQPRSM
RHGNQLVGWGMAGGVWEAMQMKASAKARFDAQGHLTVCSATTDIGTGTYTVMTQIAADAA
GARVQDVTFVLGDSSLPTAPLQGGSFTVSSVGSAVRQACQVLRTKVLEHARKMYPQVAST
AREQIIFADGYLHAGSHRLALADIIASAPEGEFEVQIDAEPGARRQPFSTATHSAVFVEV
HVDEDLGTIKVVRVVSAVAAGRVVNPKTARSQILGGVVWGVGMALHEAALTDHRLGRVVN
HNLAEYHIPVNADSGDIEVIFVEEHDDIVNELGSKGVGEIGVVGVAAAVANAVYHATGKR
VREFPITLDKVL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacccacaccggtagccggcacgtccctggaccgcgtagacggcgtggcgaag
gtcaccgggcaggcgcgttacgcgggcgaatatcccgaagtaggcctgctccatggcagc
gtggtgtccagtaccatcgcccgaggtcgggtactcaacatcgacagtacacaggcgatg
cgcgtgcccggggtgatcgctgtgcttgatcatggccatcgtccacatatttccagttat
gacgacgactacagcgacgccgacgccgcgcacggggcgccgtttcggcccttgttcgat
gatcgagtgctctacaacggtcaaccgttggcgctggtggttgcccataccctcgagctg
gcccggtatgcaggttcgctgatcaggatcgagtatgccgaggaggcccaccagaccgac
cttggcgcatgccaacagtcgcatgcagcacccgccaagacaccggcgccgcgtggtgac
tttgccgcccagtttgccggtgccccggtgcaggtggatgccacctacctgacagccaac
gagtaccacaacccgatggagccccatgcgtcaaccgtactctacaagggcgacggcacg
ctggaaatccacgacaagacccaaggcacgcaaaactgccaggactacttgcacaaggtg
tttggcctgcccaaggcaaacatccgcgtgcgcgcggcattcgtcggcggtgccttcggc
tcgggcttgcgcccgcagtaccagttgccgctggcagtgatggcggcgttgcacctgcag
cgctcggtgcgcgtcacgctgacccgccagcagatgttcacctttggctaccggccccgc
accgagcagcgcctgcgcctgggtgctgacgcaaacgggcagttgctggcgatcgcccac
gatgcgcttggccagacctctcgcttcgaggacttcaccgagcacgtggtggaatggagt
ggcatgctctaccagtgcgacaacgttgccctcagctatcgcctggcctcgctcgatgtg
tacaccccgctggacatgcgtgcgcctggcgccgcgtcggggatgattgccctggaatgc
gccatggatgagcttgcctgtgcagcgcagattgacccgcttgacctgcgccggcgcaat
ttcgccgccagcaatgccaacgagggcaagccctactccagcaaggaactgctggcgtgc
taccggcaaggtgccgaacgttttggctggcaaaaccgtaatccgcaaccgcgcagcatg
cgccatggcaaccagctggtcggctggggcatggccggcggcgtctgggaagccatgcag
atgaaggccagcgccaaagcgcgcttcgatgcccaaggccacctcaccgtctgcagtgcc
accaccgatatcgggaccggcacctataccgtcatgacgcagatcgcagccgacgcggct
ggcgccagggtgcaggatgtcaccttcgtgctgggtgactcttcactgcccaccgcaccg
ctacagggaggttcgttcacggtgtcgtcggtcggctcggccgtgcgccaggcctgccag
gtactgcgcaccaaagtgctggaacatgcacgcaagatgtacccccaagtggccagcacg
gcccgggagcagatcattttcgccgatggctacctgcacgcgggcagccatcgcctggcc
ttggcggacatcatcgccagcgccccggaaggtgagttcgaagtgcaaatcgacgccgag
cccggcgccaggcgccaaccgttctccaccgccacgcattcagcggtattcgtggaagtt
cacgtcgacgaggaccttggcacaatcaaggtagtacgggtagtcagcgccgtagcggcc
ggacgggtagtcaacccgaaaaccgcacgcagtcagattttgggaggcgtggtctggggg
gtgggtatggccctgcacgaagccgcgttgaccgaccatcggctgggccgcgtggtcaac
cacaacctggcggagtaccacatcccggtcaacgcagacagcggggatatcgaagtcatc
ttcgttgaagagcacgacgacatcgtcaacgaactggggtccaagggcgtgggcgaaatc
ggcgttgtcggggtggcagccgcggtggccaacgcggtctaccatgccacgggcaagcgt
gtgagggagtttccgatcacgctcgacaaggtgctgtga
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