Pseudomonas putida BIRD-1: PPUBIRD1_2520
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Entry
PPUBIRD1_2520 CDS
T01975
Name
(GenBank) Ku family containing protein
KO
K10979
DNA end-binding protein Ku
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PPUBIRD1_2520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppb03400
]
PPUBIRD1_2520
DNA repair and recombination proteins [BR:
ppb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PPUBIRD1_2520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
ADR60146
LinkDB
All DBs
Position
complement(2864269..2865090)
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AA seq
273 aa
AA seq
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MARAIWKGAISFGLVHIPVALNTAVRTERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDN
IVKGVEFEKGRYVVISEEEIRKARPEATQTIDIFSFVEAGDIPLQHFDTPYYLTPDRRGG
KVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLELDA
SVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIEAVEKGDA
GGAEKGADILDLTELLKRSLGGKKPVKKTRKAS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcaatctggaaaggcgccatcagttttggccttgtgcacatccccgtggca
ctcaataccgccgtgcgcaccgagcgcgtggacttcgactggctggacaagcgcagcatg
gagccggtcggctacaagcgggtgaacaaagtgaccggcaaggaaatagacaaggacaat
atcgtcaagggcgtagagttcgagaagggccgctatgtggtgatcagtgaagaggagatc
cgcaaggcccggcccgaagcgacccagacgatcgatatcttttcctttgtggaagcgggc
gatattccgctgcagcatttcgatacgccgtactacctgaccccggaccgccgtggcggc
aaggtgtacgccttgctgcgcgagacgctggaaaagaccggcaaggtggcactggccacc
gtggtattgcatacccggcagcacttggcgctgctgcggcctctggaccatgcgctggtg
atgatcaccttgcgctggcctgaagaggtgcgcgggctggaaacgctggagctggatgcc
agcgtgaccgacagcaaggtggagaagcgtgagctggagatggccaagcgcctggtagag
gacatgagcgggccctggaagcctgaggattatcatgacgccttccgccagacgatcatg
gacctggtggaggagaaggccagcaagggcaagatcgaggcggtggagaagggcgacgca
gggggggccgagaaaggtgcggacatcctcgacctgaccgaactgctcaagcgcagcctg
ggtggcaagaaaccggtgaagaaaacgcgaaaggcttcatga
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