Pseudomonas putida BIRD-1: PPUBIRD1_2569
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Entry
PPUBIRD1_2569 CDS
T01975
Symbol
benD
Name
(GenBank) BenD
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00362
Benzoate degradation
ppb00364
Fluorobenzoate degradation
ppb00622
Xylene degradation
ppb01100
Metabolic pathways
ppb01120
Microbial metabolism in diverse environments
ppb01220
Degradation of aromatic compounds
Module
ppb_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PPUBIRD1_2569 (benD)
00364 Fluorobenzoate degradation
PPUBIRD1_2569 (benD)
00622 Xylene degradation
PPUBIRD1_2569 (benD)
Enzymes [BR:
ppb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
PPUBIRD1_2569 (benD)
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Gene cluster
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Motif
Pfam:
adh_short
adh_short_C2
Epimerase
KR
ApbA
TrkA_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADR60194
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Position
complement(2916756..2917517)
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AA seq
253 aa
AA seq
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MNNRFQGKVALVTGAAQGIGRGVCWRLKAEGAQVVAVDRSELVHELAGEGMLTLTADLEQ
HADCARVMASAVETFGRLDILVNNVGGTIWAKPFEHYEVEQIEAEVRRSLFPTLWCCHAA
LPYMLERGSGVIVNVSSIATRGVNRVPYGAAKGGVNALTACLAFETAGRGIRVNATAPGG
TEAPPRRVPRNSAEQTEQEKRWYQQIVDQTLDSSLMHRYGSIDEQVGAILFLASDEASYI
TGVTLPVGGGDLG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagattccaaggcaaggtcgccctggtcaccggtgccgctcaaggcatcggc
cggggcgtgtgctggcggctgaaggctgaaggcgcgcaagtggtggcggtagaccgttcc
gagctggtccacgaactggctggcgagggcatgctcaccctcaccgccgacctggaacaa
cacgccgattgcgcccgggtcatggccagtgcggtggaaaccttcggccgcctcgacatc
ttggtcaacaacgtcggcggcaccatctgggccaagcctttcgagcactacgaagtcgag
cagatcgaggccgaagtgcgccgttcgctattcccgacactgtggtgctgccatgccgcg
ctgccctacatgcttgaacgtggcagcggcgtcatcgtcaacgtttcttccatcgccacc
cgtggcgtcaaccgtgtgccctatggcgcggccaaaggcggcgtcaatgcgctcaccgcc
tgcctggccttcgaaacggctggccgtgggatccgtgtcaacgccaccgcgccgggtggc
accgaagcaccgccccggcgggtaccgcgcaacagtgcagagcaaaccgagcaggaaaag
cgctggtaccagcagatcgtcgaccagaccctcgacagcagcctgatgcaccgctacggc
agcatcgacgagcaggtgggggccattctgttcctcgcgtccgacgaagcctcgtacatc
accggcgtgaccctgccggtagggggcggcgacctcggctga
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