Pseudomonas putida BIRD-1: PPUBIRD1_2928
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Entry
PPUBIRD1_2928 CDS
T01975
Name
(GenBank) LysR family transcriptional regulator
KO
K13794
LysR family transcriptional regulator, regulatory protein for tcuABC
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_2928
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPUBIRD1_2928
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ADR60540
LinkDB
All DBs
Position
complement(3291953..3292873)
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AA seq
306 aa
AA seq
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MELRQLRYFLSVLECGSLGRAALETGVGVSALSQQLTKLESELSTRLLTRSSVGVTPTAA
GLAFEYHARLTLRQADYAMLAARSGRMSGYASVGMAPTTASVLGLALIARMRERYPDIRL
HLVEMLSGYLVNQLNTRHLDLAVLFQLEAGMRLDARPLLEERLFALVPVALVKADWGTSL
TLQQIASLPLVMPSAQHGLRATLRVILERVGLDANIVMEVDGLSLLMDCVSAGHAATIQP
GATVARAMQAGLRVFSIDDPQAQRRNLVVSLVDDELSPAALATRIVLHEVSRDLVQQDRW
PGARLL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggagttacgccagcttcgttactttctgagtgtgctggagtgtggcagcctcggcaga
gccgcgctcgaaacgggcgttggggtatctgcgttgagccagcaactcacgaagctcgaa
agtgagttgagtacccgcctgctgacacgctctagcgttggcgtcacgcccaccgcggca
ggcttggcattcgaataccatgcgcgcctgacgctgcgccaggccgattacgccatgttg
gccgcacgcagtgggcgtatgagtgggtacgccagcgtcggtatggcacccaccacggct
tcggtgttgggcctggcgctgatcgccaggatgcgtgagcgctaccctgatatccgtctt
catttggtggaaatgctgtcgggctacctggtgaaccagctcaatactcggcacctggac
ttggcggtgttgtttcagctggaggctggcatgcggctggatgcgcggccgctgctggag
gagcggctgttcgcattggttccggtagccttggtcaaggctgactgggggacgtcgctg
acgttgcagcagatcgcctcgctgcccttggtgatgcccagcgcccagcatggtcttcgc
gccacgttacgcgtcatcctggagcgcgtcggattggacgcgaatatcgtcatggaggtt
gatggcctgtcgcttctcatggattgcgtcagcgcaggtcacgccgcgacgattcaaccc
ggcgccactgtggcccgggccatgcaggcaggcctgcgggtgttttcgatcgacgatccg
caagctcagcgtcgcaacttggtggtgagcctggtcgatgatgaactctcgcctgctgca
cttgccacgcgaatcgtgctgcatgaagtctcccgcgatttggtgcagcaggatcgctgg
cctggggcgcgtttgctgtga
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