Pseudomonas putida BIRD-1: PPUBIRD1_3012
Help
Entry
PPUBIRD1_3012 CDS
T01975
Name
(GenBank) PAS/PAC sensor hybrid histidine kinase
KO
K20975
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02020
Two-component system
ppb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPUBIRD1_3012
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPUBIRD1_3012
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppb01001
]
PPUBIRD1_3012
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppb02022
]
PPUBIRD1_3012
Enzymes [BR:
ppb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PPUBIRD1_3012
Protein kinases [BR:
ppb01001
]
Histidine kinases
Other
PPUBIRD1_3012
Two-component system [BR:
ppb02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
PPUBIRD1_3012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
HATPase_c
Response_reg
HisKA
HATPase_c_2
PAS_9
PAS
PAS_10
GldM_1st
PTS_IIA
BRE1
AAA_13
Exonuc_VII_L
OmpH
Fez1
Sec8_C
Ran-binding
Motif
Other DBs
NCBI-ProteinID:
ADR60623
LinkDB
All DBs
Position
complement(3370654..3372552)
Genome browser
AA seq
632 aa
AA seq
DB search
MPATGLLSVAELQAELTRLQHQNHKLQRINDALIERIESGVTRGNDPYAAFQHSVVLAEQ
VRERTDALNQAMAELKAVNRLLSEARQRAETAHQHQIRLITDNVPALIAYLNADLVYEFT
NKVYEEWYCWPHGVMLGQSLREAHSEQHYRRLEGYVARALAGESVTFEFAETNINGQERY
MLRSYVPNRLASGEVVGIFVLIRDITERRNTAQALHQAYQHLEQRVRERTAELTSLNDQL
LREIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDEPQ
NAAHLVRNVSNSLEDVENLLGTLVDISKLDAGVIKADVAPFALHELMDNLAAEYAQVARS
EGLELHFVGCSAVVRSDIQLLARILRNLLSNAIRYTRSGRVVLGCRRQRGGVRIEVWDSG
IGIAEEHLEDMFLEFKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVFA
VEVPLSATAPKAQPSQVICEPMLERLRGARVWVLDNDAAICAGMRTLLEGWGCRVVTALS
EEDLARQVDNYHAEADLLIADYHLDNDCNGVDAVARINARRAQPLPALMITANYSNDLKQ
QIRELGHTLMHKPVRPMKLKTAMSHLLASGVA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgcaaccggcctcctgtcggtcgctgaactgcaggccgagctgacccggctgcag
caccagaaccacaagctgcagcgcatcaatgacgcactgatcgagcgcatcgagtcgggc
gtgacccggggcaacgatccatacgccgcgttccagcattcggtggtgctggccgagcag
gtgcgcgaacgcaccgatgcgctgaaccaggccatggccgaactcaaggcggtcaaccgg
ctgctcagcgaggcccggcagcgggccgagactgcccaccagcaccagattcgtctgatt
accgacaacgtcccggcgttgatcgcctacctgaacgccgatctggtctacgaattcacc
aacaaggtttacgaagagtggtattgctggccgcatggtgtgatgctgggccagagcctg
cgcgaggcccacagcgagcagcattaccggcgcctggaaggctatgtggcgcgggcgctg
gcgggggagagcgtaacgtttgaatttgccgagaccaatatcaacggccaggagcgctat
atgctgcgctcctacgtgccgaaccgcctggccagtggcgaagtggtgggcatcttcgtg
ctgatccgcgacatcaccgagcggcgcaacaccgcacaggcgttgcaccaggcgtatcag
cacctggagcaacgggtgcgcgagcgcactgccgaactgaccagtctcaacgaccagttg
ttgcgcgaaatcgaagagcgcagccaggccgagtcgcgtctgcgcgaggccaagcgcgag
gccgagcaggccaacctgtcgaaaaccaagttcctggctgcggtcagccatgacctgctg
caaccgctgaacgcggcgcggctgttcaccagtgcgttgctcgagcgcgacgagccgcaa
aacgctgcccacctggtgcgaaatgtcagcaattcgctggaggatgtggaaaacctgttg
ggcaccctggtggatatttccaagctcgatgccggggtgatcaaggccgatgtcgccccg
tttgccctccacgaactgatggacaacctggctgccgaatacgcccaggtagcgcgtagc
gaagggttagagctgcattttgtggggtgttctgccgtcgtgcgcagtgacatccagctg
ctggcacgcatcctgcgcaacctgctcagcaatgccatccgctacacccgcagcgggcgc
gtggtgctggggtgccggcgccagcgcggtggcgtgcggattgaagtatgggacagcggc
atcggcattgccgaagaacacctggaagacatgttcctggagttcaagcggggtgatgtg
cagcgcccggaccaggaccgtgggctgggcctgggcctggcaatcgtggagaagatcgcc
ggcatcctcggccaccggatccgcgtgcgttcatggctgggcaaaggctcggtgttcgct
gtcgaggtgccgctgagcgccactgcacccaaggcccagccgagccaggtgatctgcgag
ccgatgctcgaacgcctgcgtggggcgcgggtgtgggtgctggataacgatgcggcgatt
tgcgcgggcatgcgcaccttgctggaaggttggggctgccgggtggtcactgcgctgtcg
gaggaagacctggcgcgccaggtggacaactaccacgccgaggccgacctgctgattgcc
gactaccacctggacaacgactgcaatggtgtcgacgccgtagcgcggatcaatgcccgc
cgtgcccagccgctaccggcgctgatgatcactgccaactacagcaatgatctcaagcag
cagatccgcgagctgggtcacacactgatgcacaagcccgtacggccgatgaagctcaag
acggcgatgagccatctactggccagtggcgtggcatag
DBGET
integrated database retrieval system
