KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_3291
Entry
PPUBIRD1_3291     CDS       T01975                                 
Symbol
polB
Name
(GenBank) PolB
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
ppb  Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppb03400]
    PPUBIRD1_3291 (polB)
Enzymes [BR:ppb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PPUBIRD1_3291 (polB)
DNA repair and recombination proteins [BR:ppb03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    PPUBIRD1_3291 (polB)
SSDB
Motif
Pfam: DNA_pol_B DNApolII_insertion DNApolII_N DNA_pol_B_exo1 DNA_pol_B_2 GGDEF_2
Other DBs
NCBI-ProteinID: ADR60890
LinkDB
Position
complement(3679719..3682079)
AA seq 786 aa
MELQQGFVLTRHWHDTPEGTCVEFWLATDDGPRLLRLAAQESVAFIPQAQAEHARVLLAN
EPGTKLKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVLEADIRPPERYLMERF
ITAPVQFTGQPDAQGVYREAQLRPLPGYRPALRLVSLDIETSERGELYSIALEGCGQRQV
YMLGPANGDASGLDFDLEYCTDRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAK
SLQVPLTLGRNGAVMTLRSHAGGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQT
LLGEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVT
GLAVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLD
YKSLYPSIIRTFLIDPVGLIEGLRLPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREA
AKREGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGY
DVIYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLQSALELQFEVHY
RRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVF
RSEPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQ
RPLQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTD
HQLLLF
NT seq 2361 nt   +upstreamnt  +downstreamnt
gtggagttgcagcagggttttgtcctgacccggcactggcacgatacgccggaaggcacc
tgcgtggagttctggctggccaccgatgacgggccgcggctgttgcggctggcggcgcag
gagtcggtggctttcattcctcaggcgcaggccgagcacgcccgtgtgctgctggccaac
gaacccgggacgaagctcaagccactgcgcctgaaggacttcgagcatcgcccgatgctt
ggcctctatacccgccagcatcgccaattgatgcaactggagcagcgtctgcgcacggcc
ggtatcgacgtgctcgaggccgatatccgcccgccggagcgttacctcatggagcgcttc
atcacggcgccggtgcagttcactggccagcctgatgcgcagggcgtttaccgggaagcc
cagctcaggccgctgccaggctatcgcccggcactgcgcctggtgtcgctggacatcgag
accagcgagcgtggcgagctgtacagcatcgcgctggagggctgtggccagcgccaggtg
tacatgctcggtccggccaacggcgatgccagcgggcttgacttcgacctggaatattgc
accgatcgcgccgccttgatcacgcggctcaaccagtggatggccaggcatgacccggac
gcgatcattggctggaacctggtgcagttcgacctgcgtctgctgcatgagcacgccaag
tcgttgcaggtgccactgacgctggggcgcaacggtgcggtcatgaccctgcgcagccat
gccggtggcggccacgtcttcgccgatgcgccggggcggctgctgatcgatggcatcgag
gcgttgcgttcggccacctggagctttgcctcgttcagcctggagaacgttgcccagacc
ctgctgggtgaaggcaaggccatcgacacgccgtaccaacgcatggacgaaatcaatcgc
cgcttcgccgaagacaaaccggccctggcgcgctacaacctgaaggactgcgaactggtc
acgcgcattttcgcccatacccggctgctcgacttcctgctcgaacgtgcgtcggttacg
gggttggccgtggaccgcagcggtgggtcggtagctgcgttctgtcacttgtacattccg
cagatgcaccgccttggctttgtcgcgcccagccttggcagccgcccggacgaagccagc
cccggcggttttgtcatggactcgcgcccggggttgtacgactcggtgctggtgctggac
tacaagagcctgtacccgtcgatcatccgtacctttctcatcgacccggtcgggctgatc
gaaggcctgcgtctgcctgacgacgcacattcggtcgagggttttcgcggtgggcgtttt
tcacgcacacagcactgcctgccagccatcgtcgaacgggtgtggcagggcagggaagcg
gccaagcgcgagggcaatgcgccgctgtcgcaggccttgaaaatcatcatgaatgccttt
tatggcgtgcttggctccagcggttgccgtttcttcgacccgcgcctggcgtcgtcgatc
accatgcgcggccaccagatcatgcgccagaccaggtccctgatcgaggcgtgtggctac
gatgtgatctacggtgacaccgactccacctttgtctggctcaagggtgcccacgccgag
gaagacgcggcgcgcatcggccgcgagctggtggcaaaggtcaaccaatggtggcaagcc
catctgcacgagaccatgaacctgcagagcgccctcgaactgcagttcgaggtgcattac
cgacgcttcctgatgcccaccatccgcggtaccgatgaaggcagcaaaaagcgctatgcc
ggcctggtgcagcgggccgacggtgctgaagaaatggtttacaagggcctggagtcggtg
cgcaccgactggtcaccgctggcccggcagttccagcaggaactctacggccgtgtgttc
cgcagcgagccctaccgtgattatgtacgcgagtatgtacggcgcacgttggcgggcgag
caggacgaactgctggtttatcgcaagcgcctgcgtcgcccgctggccgattaccagcgc
aacgtgccgccgcatgtgcgtgccgcacgccttgccgacgactacaacaagcgtctgcag
cgccctctgcagtaccagcgtgggggctggatcagctacgtgatcaccaccgccgggcct
gagccgctggaaaacctgcaggcaccgatcgactacgatcactacatcagccgccagcta
ctgccggtggccgacgccatcctgccctttgtcggcgatgatttcgcgcgccttaccgac
catcagttactgctgttctga

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