Pseudomonas putida BIRD-1: PPUBIRD1_3349
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Entry
PPUBIRD1_3349 CDS
T01975
Name
(GenBank) Putative AcnD-accessory protein PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00640
Propanoate metabolism
ppb01100
Metabolic pathways
ppb01120
Microbial metabolism in diverse environments
ppb01200
Carbon metabolism
Module
ppb_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PPUBIRD1_3349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
ADR60945
LinkDB
All DBs
Position
complement(3744549..3745739)
Genome browser
AA seq
396 aa
AA seq
DB search
MAHVPQIKIPATYIRGGTSKGVFFRLQDLPEQAQIPGPARDALLLRVIGSPDPYGKQIDG
MGGATSSTSKTVILSQSIKPEHDVDYLFGQVSIDKAFVDWSGNCGNLSAAVGSFAISSGL
VDPARIPRNGIATVRIWQANIGKTIIAHVPITEGEVQETGDFELDGVTFPAAEVQLEFLD
PAADEDGGGGAMFPTGNLVDDLEVPGVGTFKATLINAGIPTIFVNAADIGYTGTELQDAI
NGDPQALLRFETIRAYGAVRMGLIDNVDQAAGRQHTPKVAFVAPPSTYTASSGKAVQAVE
IDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGERSAVRFGHPSGTLRVG
AEARQVNGEWTVTKAIMSRSARVLMEGWVRVPGDSF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgtaccccagatcaaaatccccgccacctacatccgcggcggcaccagcaaa
ggcgtgttcttccgcctgcaagacctgcccgagcaggcgcaaattccaggtcccgctcgc
gatgcgctgctgctgcgggtaatcggcagccccgacccttacggcaagcagatcgatggc
atgggcggcgccacgtcgagcaccagcaagaccgtgatcctgtcgcaaagcatcaaaccc
gagcacgatgtcgactacctgttcggccaggtcagcatcgacaaggccttcgtcgactgg
agcggcaactgcggcaacctgtccgctgcggtcggttcgtttgccatcagcagtggcctg
gtcgacccggcgcgtattccgcgcaacggtatcgctaccgtgcgtatctggcaggcgaat
atcggcaagaccatcatcgcccatgtcccgatcactgaaggtgaagtgcaggaaaccggc
gacttcgagctggacggggtgaccttcccggcggccgaggtgcagctggagtttcttgac
cctgcagccgatgaagacggcggtggcggtgccatgttccccaccggcaatctggtcgat
gacctggaagtgccgggggtcggtacgttcaaggcgaccctgatcaatgccggtatcccg
accatctttgtcaatgctgccgatatcggctacaccggtaccgaactgcaggacgccatc
aacggcgatccgcaggcgctgctgcgcttcgagaccattcgcgcctacggcgccgtgcgc
atggggcttatcgacaacgtcgaccaggctgccgggcgtcagcacacgccgaaagtggcg
ttcgtcgcgccgccgagcacctacactgcctccagtggcaaggcggtgcaggccgttgag
atcgacctgctggtgcgggccttgtcgatgggcaagttgcaccatgccatgatgggtacg
gctgcggtggcaattggcactgcggcggccattccgggcacgctggtcaacctcgccgct
ggcgggggcgagcgcagcgctgtgcgtttcggtcatccttcgggcaccctgcgggtcggg
gccgaggcacgccaggtgaatggtgagtggacggtaaccaaggcaatcatgagccgtagt
gctcgcgtgctgatggagggctgggttcgcgtgcctggcgacagcttctaa
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