Pseudomonas putida BIRD-1: PPUBIRD1_3365
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Entry
PPUBIRD1_3365 CDS
T01975
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppb01002
]
PPUBIRD1_3365
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
PPUBIRD1_3365
Peptidases and inhibitors [BR:
ppb01002
]
Cysteine peptidases
Family C82
PPUBIRD1_3365
Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PPUBIRD1_3365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
ADR60960
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All DBs
Position
complement(3762556..3763533)
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AA seq
325 aa
AA seq
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MLPRFPAVTRSLSLAALLVAGPAAALELPLPPPGEDIVGQVHVIKAKYEDTFADIGTAND
LGYLEMIAANPGVDPWLPGAGTEIILPTRFVLPPGPREGIVINLAEYRMYYFPKGESVVY
TFPLGIGREGWGSPIANTKITAKTPNPTWTPPASIRKEHAEDGDILPTVVPAGPDNPLGP
FKFTLGVPGYLIHGSNKKFGIGMRTSHGCFRMFNNNVLELSKMVPVGTPVRIINEPYKFG
ISAGKVYLEAHTPLDDQGNPSVVDKHTAVINALLKREDLANNLRMNWDMVRDVVAAEDGM
PVEIAVPVENQGAAPMVTSIPPELQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcgctttcctgccgtcacccgtagcctgtccctggccgccctgttggtagcg
ggccccgctgctgcgctggagctgccactgccaccgcccggtgaagacatcgtcggccaa
gtgcatgtgataaaggcaaagtacgaggacacgttcgccgatatcggcaccgcgaacgac
ctcggctacctggaaatgattgccgccaaccccggcgtggacccttggctgccgggcgcc
ggcaccgagatcatcctgccaacccgtttcgttctgccgccgggcccgcgcgaaggcatc
gtcatcaatctggctgagtaccgcatgtactacttccccaagggggagagcgtggtgtac
accttcccgttgggcattggtcgcgaggggtgggggtcgccgatcgccaacaccaagatc
accgccaagacgcccaacccgacctggacgccgcccgcttcgattcgcaaagagcacgcc
gaggacggtgatatcctgccaactgtggtgccggctggcccggacaacccgctggggccg
ttcaagttcaccttgggcgtaccgggctacctgatccatggttcgaacaagaagttcggc
attggcatgcgcaccagtcacggttgcttccgcatgttcaacaacaacgtgcttgaactg
tcgaagatggtgccggtggggactccggtgcgcatcatcaacgagccttacaagttcggt
atcagcgctggcaaggtctatcttgaggcacacacgccactggatgaccagggtaacccg
tcggttgtcgacaaacacaccgcagttatcaatgccttgctcaagcgcgaagacctggcc
aataacctacgcatgaactgggacatggtgcgtgacgtggtggctgcagaagatggtatg
ccggtagaaattgccgtgccggtggaaaaccaaggggccgcaccgatggtgacgagcatt
ccgcccgaactgcagtaa
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