Pseudomonas putida BIRD-1: PPUBIRD1_3522
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Entry
PPUBIRD1_3522 CDS
T01975
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
PPUBIRD1_3522
Enzymes [BR:
ppb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PPUBIRD1_3522
Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PPUBIRD1_3522
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ADR61115
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Position
3939187..3941112
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AA seq
641 aa
AA seq
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MRSRLLHIASCLLLTAATSAAQAIDLTLQRQYYDEAKRALAKGDKGPYLRYAQALSDYPL
TPYLAYDELTARLKSASNQEIEGFLAKHGDLPQANWMKLRWLRWLAERGEWDTFVKYYDP
KLNFTELDCLNGQYQLSHGLRAEGYATADKLWNVGKSQPAACDTLFGMWAAEGQLTEAKR
WERTKLAAQARNYGLANTLVKTLTTLGPQGRLLVDVAQKPELLNQPSRFTPVNEAMSDVV
SLGLRRLARQNPERAMALLDDYAQRMHFSRDEKVAIAREIGLTLARRYDPRALDLMTRYD
PELRDNTVSEWRLRLLLRLGRWEDAYELTKRLPQDLASTSRWKYWQARSLELAQPNNPQI
PLLYKTAARERDFYGFLAADRSQTPYQLNNKPLLLSPQLVKKVRNTPGIQRALEFHARGQ
IVDGRREWYHVSRHFTRDEMVAQARLGYELRWYFPAIRTISQARYWDDLDIRFPMAHRDT
LVREAKVRGLHSSWVFAITRQESAFMEDARSPVGASGLMQLMPATAKETARKFSIPLASP
AQVLNPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLKGAKHLSFDVWVES
IPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccgcctgttacatatcgcatcctgcctgctgcttaccgctgccaccagcgcg
gcgcaggccatcgacctgaccctgcaacgccagtactatgacgaagccaagcgagcgctg
gccaaaggcgacaaaggcccgtacctgcgctatgcccaggcgttgagcgactacccgctg
acgccctacctggcctacgacgaactcaccgcccgcctgaaaagcgccagcaaccaggaa
atcgaaggtttcctggccaagcatggcgacctgccccaggccaactggatgaaactgcgc
tggttgcgctggctggccgaacgcggcgagtgggataccttcgtcaagtactacgacccc
aagctcaacttcaccgaactggactgcctcaacggccaataccagctcagccacggcttg
cgcgccgaaggttacgccaccgccgacaagctgtggaacgtcggcaaatcgcaacctgcc
gcctgcgacacgctgttcggcatgtgggcagccgaaggccagctgaccgaggccaagcgc
tgggaacgcaccaagctggcagcccaggcacgcaactacggcctggccaacaccttggtc
aagaccctgaccaccctcggcccgcaggggcgcctgctggtcgacgtcgcgcagaagccc
gagctgctcaaccagccgtcgcgctttaccccggtcaacgaggccatgtccgacgtggtc
agcctcggccttcgtcgcctggcccggcagaacccggagcgggccatggcactgctcgac
gattacgcccagcgcatgcacttctcgcgtgacgaaaaggtggccatcgcccgcgaaatc
ggcctgaccctcgcgcgccgctacgacccacgcgcgctcgacctgatgacccgctatgac
cccgagttgcgtgacaacactgtcagcgaatggcgccttcgcctgctgctgcgcctgggc
cgctgggaggacgcttacgagctgaccaagcgccttccccaggacctggccagcaccagc
cgctggaagtactggcaggctcgcagcctggagctggcacagcccaacaacccgcagatc
ccgctgctgtacaagaccgcagcgcgtgagcgtgacttctatggcttcctcgccgccgac
cggtcacaaacaccgtaccagctgaacaacaagccgctgctgctgagcccccagctggtc
aagaaggttcgcaacacgcccggcatccagcgcgcactggaattccacgcccgcggtcag
atcgtcgacggccgtcgtgagtggtaccacgtcagccgccacttcacccgtgacgaaatg
gttgcacaggcacgcctgggctatgagctgcgctggtacttcccggccatccgcaccatc
agccaggcccggtactgggacgacctggacatccgcttccccatggcccaccgcgacacg
ctggtgcgtgaagccaaggttcgcggcctgcattcgagctgggtattcgccatcactcgc
caggaaagcgccttcatggaagacgcacgctcacccgtgggcgccagcggcctgatgcaa
ctgatgccggccaccgccaaggaaaccgcacgcaagttcagcatcccgctggcctcaccg
gcgcaagtgctgaacccggacaagaacatccagctgggtgcggcctacctgagccaggta
cacagccagttcaacggcaaccgggtgctggcttcggcagcctacaacgccgggcccggg
cgcgtgcgacagtggctcaaaggggccaagcacctgagcttcgatgtgtgggtggagtcg
atcccgttcgacgaaacgcgccagtatgtacagaacgtgctgtcgtattcggtgatatac
gggcagaagctgaattcaccgcagccactggtggattggcatgaacggtatttcgatgac
atgtga
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