Pseudomonas putida BIRD-1: PPUBIRD1_3577
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Entry
PPUBIRD1_3577 CDS
T01975
Symbol
lysA
Name
(GenBank) LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00300
Lysine biosynthesis
ppb00470
D-Amino acid metabolism
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01120
Microbial metabolism in diverse environments
ppb01230
Biosynthesis of amino acids
Module
ppb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPUBIRD1_3577 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPUBIRD1_3577 (lysA)
Enzymes [BR:
ppb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PPUBIRD1_3577 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADR61169
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All DBs
Position
4003790..4005022
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AA seq
410 aa
AA seq
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MTAPFTLLAEAVRQHGSPLWAYDTRTIADRVKQLNVFDTVRFAQKANPNLHVLRLMRAHG
LVLDAVSLGEMERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQ
LGERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVH
MHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWA
VARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPA
MYGAYHGMTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLV
IHDAGAYGASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLSLEAGF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccttcaccctcctggccgaggcggttcgccagcacggctcgccactatgg
gcatacgacacccgcaccatcgccgatcgtgtcaagcagttgaacgtgttcgacaccgta
cgtttcgcccagaaagccaacccgaacttgcatgtgctgcgcctgatgcgcgcccatggc
ctggtgctggacgcagtgtcgctgggagagatggaacgggccttcgccgccggcgcgagt
gttgacggtgaccctgccggcgtggttttgacctgcgacgcgctggaccgccccaccctg
gaacgcgtggtggcgtcaaagatcgaagtcaatgccggctccattgacatgctgcgccaa
ctgggtgaacgctcgcccggccaccgcgtgtggatccgcatcaacccaggcttcggccat
ggccacagccgcaagaccaataccggcggcgaaaacagcaagcatggcatctggcacgaa
gagctggacgaagcgctggcgtgcatcaaggcccatggcctgcacctggtgggcgtgcac
atgcacattggttccggggtggactaccagcacctggaacaggtggcccgctcgatgatc
gagctgatcggccgtctgggcgtggacatcgaggcgttctccatcggcggcgggctttcc
accccttaccgcagcaccgacaaaccggtcgacctgcagcgctatgcgcagacctgggcg
gtggcgcgcaaggagatcgaagcgatgctcggccacccggtgcgcatggagatcgaaccc
gggcgcttcctggtggcggagtcgggctacctggtggccgaagtccgtgccgtgaaacag
gtggggcgcaataccttcgtcatgatcgacgccggcttcaacgacctgatgcgcccggcg
atgtacggcgcctaccacggcatgaccctgctcgatgccgatggccaggcagtagatcgc
ccgcgccagccgaccgtggtggccgggccgttgtgtgaatcgggtgacgtgttcactcag
gatgaccaggcactgaccccgcaggacctgccccaggcacaggtgggcgacctgctggta
atccacgatgccggggcctatggcgcgtcgatgtcgtcgaactacaacagccggccgctg
ctgccggagttcctgatcgagaacggtgccctgcggatgatccgccggcgccagacggtg
caggacctgctgagcctggaggccgggttctaa
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