Pseudomonas putida BIRD-1: PPUBIRD1_3579
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Entry
PPUBIRD1_3579 CDS
T01975
Name
(GenBank) Anti-FecI sigma factor, FecR
KO
K07165
transmembrane sensor
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPUBIRD1_3579
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecR
DUF4880
DUF7092
DUF5545
Motif
Other DBs
NCBI-ProteinID:
ADR61171
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All DBs
Position
4005756..4006691
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AA seq
311 aa
AA seq
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MDLKTLEAAATWYVQLNDGANSEARTQAWRQWLQASPQHAAAWARVEKLQQQWAMVPPQA
ALSGLGAAQAQRRDVLKVLGLLMAMGGGSWLAAEQVPHRALLAQHSTRSGERRALHLEDG
SQLELNVDTALDVRYATKVRAIQLYQGEILVRPVSDRQQRPFIVHTDDGSVLARSTAFSI
RKLAQQTRVGVLEASVEVRPLRHPDRVLQLHAGQQVSFDQDVVLDAHALPADSTAWLQGM
LSVNDWRLGDFLEELGRYRPGVLRCASSIQAMSISGAFRIDDTDIALANLPKTLPVKVRY
LSRYWVSVEPA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaagacactcgaagccgctgccacctggtatgttcagctcaacgacggcgcc
aatagcgaggcccgcacccaggcctggcgacagtggctgcaggccagcccccagcacgca
gccgcctgggcgcgggtagaaaagctgcagcagcaatgggccatggtgccgccgcaggcg
gcgctgtccggccttggcgcggcccaggcgcagcggcgtgacgtgctgaaagtgctgggc
ctgctgatggccatggggggcggcagctggctggcggccgagcaggtgccccatcgtgcc
ttgctggcccagcacagtacccgcagcggcgagcgccgcgccctgcacctggaagatggt
tcacagctggagctgaacgtggataccgcgctggatgtgcgctacgccacaaaggtgagg
gcgattcagctgtatcagggggaaattctggtgcgtccggtcagcgatcgtcagcagcgc
ccgttcatcgtgcacaccgatgacggcagcgtactggcccgcagtaccgcgttcagcatc
cgcaaactggcgcagcagacccgcgtgggtgtgcttgaggccagcgtcgaagttcgcccc
ctgcgccaccctgatcgagtgctgcaactgcacgctggccagcaagtgagttttgatcag
gatgtcgtcctcgacgcccatgcactccccgccgattccacggcctggttgcaaggcatg
ctcagcgtgaacgactggcgccttggcgatttcctcgaagaactggggcgctatcgtcca
ggtgtgctgcgctgtgcctcgtcgatccaggccatgagcatttccggtgcgttccgcatt
gacgacaccgatatcgccctggccaacctgccgaaaaccttgcccgtgaaagtgcgctac
ttaagccgctactgggtgagtgtggagcccgcctga
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