Pseudomonas putida BIRD-1: PPUBIRD1_3624
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Entry
PPUBIRD1_3624 CDS
T01975
Name
(GenBank) TPR repeat-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_3624
Transporters [BR:
ppb02000
]
Other transporters
Pores ion channels [TC:
1
]
PPUBIRD1_3624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
VWA_2
TPR_16
TPR_8
TPR_9
TPR_14
TPR_11
TPR_12
TPR_4
Ubiq_DUF_assoc
VWA
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ADR61215
LinkDB
All DBs
Position
4059365..4061083
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AA seq
572 aa
AA seq
DB search
MIDLWPQWLRPLWLLAVPVLGWLLYKLWHRRKRAGRWQMILPPAFHGVLLGGGSGSTSKL
PWVALGLAWLLVILALLGPSWQRLEESRQRPADPLVILLELTPQMLAEDSPPNRLEQARR
KILDLLEHRRDSQTALVVYAGSAHTLVPLSDDLATTRNLLEAIDPSIMPKPGQRADLAVQ
KGLALLAQSGLGQGRLLLVGSALSAAERQGITQALGRQGPSLLMLGIGSREGAPVRQANG
EYLKDDQGGILLPRLDSASLKGFISGTGGRYRHARIDDLDLRGLGLFDNPRSGRNDGQTL
QLDSWADQGYWLLIPLLLLAACAGRRGWLFCLPLLLALPQPGQAFELNDLWLRPDQQGQK
LLEQNRPASAARHFQNPQWRGMALYQAGDYAGAAEAFSQGDTAAAHYNRGNALAHSGELE
AALDAYEQALERQPDLQAALDNQALVQQLLQQREAKAEEQPPGSDAQGTPGSETEGNSSS
ASSPSQGTPGNDQQASPEQPGESSSNSQAAPGNQAGGDDSVIQPPQRPVSTSLDGEQRQA
LEQWLREIPDNPAELLRRKFWYEQQLHQEKSR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacttgtggccccaatggctgcgcccactctggctgctggcggttcccgtgctc
ggctggctgctgtacaagctgtggcaccggcgcaagcgtgccgggcgctggcagatgatt
ctgccacccgccttccatggtgtactgctgggtggcggcagcggcagcaccagcaaactg
ccgtgggtggcgctgggcctcgcctggttactggtgatcctggcgctgcttgggcccagc
tggcagcggctggaagaaagccgtcagcgcccggccgaccccctggtgatcctgctcgaa
ctgaccccgcaaatgctcgccgaggacagcccgcccaaccgcctggaacaggcccggcgc
aagatcctcgacctgcttgaacaccgccgcgacagccagacagcgctggtggtgtatgcc
ggctccgcgcacaccctggtgccgctgtccgacgacctggccaccacccgcaatttgctc
gaggccatcgacccgtcgatcatgcccaaacccggccagcgtgccgacctggccgtgcaa
aaaggcctggcgctcctggcccagagcggcctcggccaaggccgcctgctgctggtaggc
tcggcgctcagcgccgccgagcgccagggcatcacccaggccctcggccgccagggccca
agcctgctgatgctgggcatcggcagccgcgaaggcgccccagtgcgccaggccaatggc
gaataccttaaagacgaccagggcggcatcctcttgcctcgcctggacagcgccagcctg
aagggttttatcagcggcacgggcgggcgctaccggcacgcccgcatcgacgacctcgac
ctgcgtggcctgggcctgttcgacaacccgcgaagcgggcgcaatgacggccagaccctg
caactggacagctgggccgaccaaggttactggctgctgattccgttgttgctgctggcc
gcctgcgccggccggcgcggctggctgttctgcctgccgctgctgctggccttgccgcag
cctggccaggctttcgaactcaacgacctgtggctgcgccccgaccagcaaggccagaag
ctgctggagcaaaaccgcccggccagcgctgcgcgtcacttccaaaacccgcaatggcgc
ggcatggccctgtaccaggccggcgactatgccggtgccgccgaggcattttcccaaggc
gacactgcagcagcccactacaatcgaggcaatgccctggcccacagtggcgagctggaa
gccgccctggatgcctacgagcaagccctggagcgccagcccgacctgcaggccgcgttg
gacaaccaggcgctggtgcagcaactgctgcagcaacgtgaagccaaggccgaggaacaa
ccgcccggcagcgatgcccaaggcacgcccggcagcgaaaccgaaggcaacagcagctca
gccagcagcccgtcccaaggcacacccggcaacgaccaacaggccagccccgaacaaccc
ggcgaaagcagcagcaacagccaggccgcccccggcaaccaggccgggggcgacgacagt
gtcatccagccgccacagcgcccggtgtcgaccagcctcgacggcgaacagcgccaagcc
ctggagcaatggctgcgggagatccccgacaacccagcagagctgctgcgacgcaaattc
tggtatgaacagcaattgcatcaggaaaaatcacgatga
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