Pseudomonas putida BIRD-1: PPUBIRD1_3740
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Entry
PPUBIRD1_3740 CDS
T01975
Name
(GenBank) Histidine kinase
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02020
Two-component system
ppb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPUBIRD1_3740
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPUBIRD1_3740
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppb01001
]
PPUBIRD1_3740
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppb02022
]
PPUBIRD1_3740
Enzymes [BR:
ppb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PPUBIRD1_3740
Protein kinases [BR:
ppb01001
]
Histidine kinases
Other
PPUBIRD1_3740
Two-component system [BR:
ppb02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
PPUBIRD1_3740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
DUF4164
PDE8A_N
HATPase_c_2
Receiver_CRE1
SIMPL
Motif
Other DBs
NCBI-ProteinID:
ADR61329
LinkDB
All DBs
Position
4190434..4192791
Genome browser
AA seq
785 aa
AA seq
DB search
MLAQRKERETGSGLMDIKFTNRLSYKQARLTVLVGFILGTLLSLIQIGIDYASEDASINR
EVNALLQISHNPASRIAYNIDSELALELTRGLLQSPAVIRARLIDNNETVLADVERPKLQ
DRSRPLSDFLFGEQRQFKERLYLTQMPEQYLGTLYLDIDTFAFGSRFLERAGITLLNGFA
RSLVLTGLLLALFYMMLTKPLVTVIGALSGSDPRKPRQTRLECPHGHEHDEIGVLVKVAN
QQFVSMATEIEQRRTAENRLTQYLNELEDIVSARTNELKASNSSLSLSNQELEQARSRAL
DMAQARAAFLANMSHEIRTPLNGMLGMIALALDNPLPSEQRQQLAIAHDSGKVLVELLND
ILDLSKFDAGQLELERIAFDMGSMVEDTANLLSQNTAQSVELTCLIASDFPSSVLGDPTR
VRQIVSNLLSNALKFTRFGRVDVRLAAIVGGVRLEVRDTGIGIPEDAQARIFQPFTQAGA
GITRQYGGTGLGLALTRNLCKAMQGHLHIRSEPGFGSSFTAELPLTVHTEAIPPAPLHGR
VAALSAAGSGLNELLQHLLPAWGLTYQRHDSYATLDAAVVDLLITDDVEHLFELRPALKT
PILLVTAYGNFLPNEQSLALAPLHQLARPLARNALYQTLRRTLQGHEPEHPLAIPVLTQE
QGRARILLVEDNPVNQLVAKGMLAKLGCQVQLATQGAEALELLAREEFDLVLMDCNMPVM
DGYEASRRIRQSGRWPELPIVALTANAMPEERERCRAAGMNDYLAKPFRREELLALVDHW
VPFSG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgcagcgcaaggaacgggaaaccggctcgggactcatggatatcaagttcacc
aatcgcctgtcatacaagcaagcccggttgacagtcctggtcggcttcatcctgggaaca
ttgctcagtctcatccagatcggcatcgattatgccagcgaagacgcgtccatcaaccgt
gaagtgaacgcgttgctgcaaatcagccacaacccggcctcgcgcatcgcctacaacatc
gactcggaactggcgctggagctgacccgcggcctgctgcagtcgccggccgtcatccgc
gcacgactgatcgacaacaacgaaacggtactggccgatgtcgagcggccaaaactgcag
gaccgctcccggccactcagcgacttcctgttcggcgagcaacgccagttcaaggagcgc
ctgtacctgacccagatgccggagcaatacctgggcaccctgtacctggacatcgacacc
ttcgccttcggcagccgctttctcgaacgtgccggcatcaccctgctcaatggttttgcc
cgcagcctggtgctcaccggcctcctgctggcgctgttctacatgatgctgaccaagccg
ctggtgacggtgattggcgcactcagcggcagcgacccgcgcaaaccccggcaaacgcgc
ctggaatgcccacacggacatgagcatgacgaaatcggcgtgctggtgaaggtcgccaac
cagcagttcgtcagcatggccaccgagatcgaacagcggcgcactgcggaaaaccgtctg
acccagtacctgaacgagctggaagacatcgtgtcggcgcgcaccaacgagctcaaggcc
agcaacagcagcctcagcctgtccaaccaggagctggaacaagcccgcagccgagcgctg
gacatggcccaggctcgcgccgccttcctggccaacatgagccacgaaatccgcaccccg
ctcaacggcatgctgggcatgatcgccctggcgctggacaacccgctgcccagcgaacaa
cgccagcaactggctatcgcccacgactcgggcaaggtgctggtagagctgctgaacgat
attctcgacttgtccaagttcgatgccggccagctggaactggaacgcattgcgttcgac
atgggctcgatggtggaagacactgccaacctgctgtcgcagaacaccgcgcaaagtgtg
gagctgacctgcctgatcgccagcgacttccccagcagcgtgctcggcgaccccacgcgt
gtgcggcagatcgtcagcaacctgctgtccaacgcgctgaaattcacccgcttcggccgc
gtcgatgtgcgcttggcggccattgtcggtggtgtgcgtcttgaggtacgggataccggc
atcggcatccccgaagacgcccaggcgcgcatcttccagcctttcacccaggccggcgcc
ggcatcacccgccagtacggtggcaccggcctgggcctggcgctgacgcgcaacctgtgc
aaggccatgcaaggccacctgcacattcgctccgagccgggctttggcagcagttttacc
gccgagctgccgctgaccgtgcacaccgaagccatcccgccagcgcccttgcatggccgc
gtggccgcactgagcgcagccggcagcgggctcaatgaactgttacagcacttgctgccc
gcctggggcctgacctaccagcgccatgacagttacgccacgctggatgcggcagtggtc
gacctgttgatcaccgacgacgtcgagcacctgttcgaactgcgcccggcattgaaaacc
ccgattctgctggtgactgcctacggcaacttcctgcccaacgagcagtccttggccttg
gcaccgctgcaccagctggcccgaccattggcacgcaacgccctgtaccagaccctgcgc
cgcacgttgcaaggccatgagcccgaacacccgctggccatcccggtccttacccaggag
caaggccgtgcgaggatactgctggtagaagacaacccggtgaaccagctggtggccaag
ggcatgctggccaagctcggctgccaggtgcaactggccacccagggtgcggaagccctt
gagctgctggcgcgtgaggaattcgacctggtgctgatggactgcaacatgccggtgatg
gacggctacgaggccagccggcgtatccgccaaagcggccgctggcccgagttgcccatc
gtcgccctcaccgccaacgcgatgcccgaagagcgcgaacgctgccgggcggcgggcatg
aacgactacctggccaagcctttccgccgcgaagagctactggccctggtcgaccattgg
gtgcccttcagcggctga
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