Pseudomonas putida BIRD-1: PPUBIRD1_3990
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Entry
PPUBIRD1_3990 CDS
T01975
Symbol
mutS
Name
(GenBank) MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PPUBIRD1_3990 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppb03400
]
PPUBIRD1_3990 (mutS)
DNA repair and recombination proteins [BR:
ppb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PPUBIRD1_3990 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
ADR61573
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Position
4463703..4466276
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AA seq
857 aa
AA seq
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MSDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG
QSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDD
WPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY
AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMA
SRLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRFEKLQPQLKEIGDIERILARIGLRNAR
PRDLARLRDALGALPELQNAMTELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIRD
GGVLKAGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELPTKQ
AEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLISHLAP
LQDSAAALAELDVLSNLAERALNLDLNCPRFVDEPCLRIEQGRHPVVEQVLTTPFVANDL
GLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY
TLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
TAVIQRAREHLGRLETTSLPHEQPAAHKAKDAPQVPHQSDLFASLPHPAIEKLGKLQLDD
MTPRQAIEMLYQLKNLL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctttccgcacacaccccgatgatgcagcagtactggaagctgaaaaaccag
cacccggaccagctgatgttctaccgcatgggcgacttctacgagatcttctacgaagat
gcgaaaaaggccgcgaaactgctggatatcacgctgaccgcccgcggtcagtcggccggc
cagtccatccccatgtgcgggattcctttccattcgctggaaggctacctggccaagctg
gtcaagctcggcgagtcggtggtgatctgtgagcagatcggcgaccccgccaccagcaag
ggcccggtggagcgccaggtagtgcgcatcatcacacccggtacggtcagtgacgaggca
ctgctcgacgagcgccgcgacaacctgatcgccgcactgctcggtgacgaacgcctgttc
ggcctggcggtactggacatcaccagcggcaatttcagcgtgcaggagatcaagggctgg
gaaaacctgctggccgaactcgagcgcctgaacccggtcgagctgttgatccccgacgac
tggccacgggacctgcctgcggagaaacgcccaggcgcccgccgccgcgccccttgggac
ttcgaccgcgactcggcacgcaaggccctgtgccagcagttcgcaaccaaggacctcaag
ggcttcggctgcgacaagctgaccctggccatcggtgccgccggctgcctgctgacctac
gccaaggaaacccagcgcaccgccctgccgcacttgcgtagcctgcgccacgagcgtctg
gacgatacggtcatcctcgatggggccagccggcgtaacctggagctggacatcaacctg
gccggcgggcgcgacaacaccctgcaatcggtgatcgaccgctgccagaccgccatggcc
agccgcctgctgagccgctggctgaaccgcccactgcgcgacctcaaggtgctgcaagca
cgccaggactcgatccgctgcctgctcgacagctaccgcttcgaaaagctgcagccgcag
ttgaaggaaattggcgatatcgagcggatcctcgcccggattggcctgcgcaatgcccgc
ccgcgcgacctggcacgcctgcgcgatgcgctgggcgcgttgccagaactgcagaacgcg
atgaccgagctcgaagcgccacacctggcgcgtctggcggccattaccggtacctatccg
gagctggccagcctgttggagcgggcgatcatcgataacccgccggcggtgatccgcgac
ggcggagtactgaaggccggctatgacaacgaactggacgagctgctggcaatcagcgag
aacgccggtcagttcctgatcgacctggaagcccgggaaaaggctcgcaccggcctggcc
aacctcaaggtcggctacaaccgcgtacacggctacttcatcgaactgccaaccaagcag
gccgaacaggccccgggcgactacatccgccgccagaccctcaaaggcgccgagcgcttc
atcaccccggagctgaaggcgttcgaggacaaggcattgtcggccaagagccgcgccctg
gcccgcgagaagatgctctacgacgcgctgctggaaaccctgatcagccacttggcgccg
ctgcaggacagtgccgccgcgctggccgagctggatgtgctcagcaacttggccgagcgc
gcactgaacctcgacctgaactgcccacgcttcgtcgacgagccttgcctgcgcatcgag
cagggccgccacccggtggtggagcaggtgctgaccacgccgttcgtggccaacgacctg
ggcctggacaacagtacgcgcatgctgatcatcaccggcccgaacatgggcggtaagtcg
acatacatgcgccagaccgctctgatcgtgctgctggcgcacatcggcagcttcgtgccg
gcagccagctgcgagctgtcgctggtcgaccgcatcttcacccgcatcggctccagtgac
gacctggccggcgggcgctcgaccttcatggtggagatgagcgaaaccgccaacatcctg
cacaacgccaccgaccgcagcctggtgctgatggacgaagtgggccgcggtaccagcacc
ttcgacggcctgtcgctggcctgggctgccgctgagcgcctggcccagctgcgtgcctac
accttgttcgccacccactacttcgaactgaccgtgctgccggagagcgagccgctggtg
gccaacgtgcacctgaacgccaccgagcacaatgaacgcatcgtgttcctgcaccacgtg
ctacccggccctgccagccaaagctacggcctggccgtcgcacagctggccggcgtaccg
acggcagtgatccagcgtgcccgcgagcaccttggccggctggaaaccaccagcctgccc
catgagcagcctgcggcccacaaggccaaggacgcgccgcaagtgccgcatcagagcgac
ttgtttgccagtctgcctcatccagccatcgagaagctgggcaagctgcaactggacgac
atgaccccgcgtcaagctatcgaaatgctatatcaactaaagaacctgttataa
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