Pseudomonas putida BIRD-1: PPUBIRD1_4016
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Entry
PPUBIRD1_4016 CDS
T01975
Name
(GenBank) Surface antigen (D15)
KO
K07277
outer membrane protein insertion porin family
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppb03029
]
PPUBIRD1_4016
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_4016
Mitochondrial biogenesis [BR:
ppb03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
PPUBIRD1_4016
Transporters [BR:
ppb02000
]
Other transporters
Pores ion channels [TC:
1
]
PPUBIRD1_4016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
POTRA_2
YqfD
Motif
Other DBs
NCBI-ProteinID:
ADR61599
LinkDB
All DBs
Position
complement(4491901..4494261)
Genome browser
AA seq
786 aa
AA seq
DB search
MKRLLLTAVMSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGDQADDRRLVD
STRSLFKTGFFQDIQLSRDGNVLIINVVERPSVSSIEIEGNKAISTEDLMKGLKQSGLAE
GEIFQRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRNRVALKIKINEGTVAAIQHIN
IVGNNVFDDETLGQLFELKTTNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIA
STQVSITPDKKHVYITVNINEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVM
TSTSELITRRLGNEGYTFANVNGVPQPNDQDHTVDIMFVVDPGKRAYVNRINYRGNTKTE
DEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPQVPGTDDQVDVNYSVEEQ
ASGSITASVGFAQSAGLILGGSISQSNFLGTGNKVSIGLTRSEYQTRYNFGFVDPYFTAD
GVSLGYNAFYRSTDYDDLDVDVASYAVDSYGAGVSLGYPISETSRLTYGLSVQQDKIKTG
KYTVDEIFDFLEQEGDNFLNFKASIGWSESTLNKGVLATRGHSQSLTLESTVPGSDLSFF
KLDYRGQLFKPITSDYTLRLHTELGYGDGYGSTSGLPFYENYFAGGFNSVRGFKDSSLGP
RSTPSIGEAAGGKPGTIADPDQDPLPFGGNVLVQGGAELLFPLPFVKDQRSLRTSVFWDV
GNVFDTNCGNKPDCEKVGFSGMASSVGLGVTWITALGPLSFSLAMPVKKPDDADTQVFQF
SLGQTF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtctgctgctaactgcggtcatgtccgcactgatgatcgctgaagttcacgcc
gagtccttcaccatctccgatattcgcgtcaacggcctgcagcgggtttccgctggcagt
gtgttcggtgccttgccgctgaacgttggcgaccaggccgacgaccgccgcctggtggac
tcgactcgttccttgttcaagaccgggttcttccaggacatccagttgagccgcgatggc
aatgtgctgatcatcaacgtggtcgagcgcccgtcggtgtcgagcatcgagattgaaggc
aacaaggcgatcagcaccgaagacctgatgaagggcctgaaacaatcgggcctggccgaa
ggcgagatcttccagcgtgccaccctcgaaggtgtgcgtaacgagctgcagcgccagtac
gtggcacaggggcgctactcggccgaggttgacgccgaagtagtgccacagccgcgcaac
cgtgtggcgctgaagatcaagatcaacgaaggcaccgtcgccgccatccagcacatcaac
atcgttggcaacaacgtattcgatgacgagaccctggggcagctgttcgaactgaagacc
accaactggttgtcgttcttcaagaacgacgacaagtacgcccgtgaaaaactctccggt
gacctggagcgcctgcgttcctactacctggaccgcggctacatcaacatggacatcgcc
tccacccaggtgtccatcacgccggacaagaagcacgtctacatcaccgtcaacatcaac
gaaggcgagaaatacaccgttcgcgacgtgaagctgtccggtgacctcaaggtgccggaa
gaccaggtcaagtcgctgctgctggtgcagccgggccaggtgttctcgcgcaaggtgatg
accagcacgtccgagctgatcacccgccgcctgggtaacgaaggctacaccttcgccaac
gtcaacggcgtgccgcaaccaaacgaccaggatcacacggtcgatatcatgttcgtggtc
gacccgggcaagcgtgcctacgtcaaccgcatcaactaccgcggcaacaccaagaccgag
gacgaagtgctgcgtcgcgaaatgcgccagatggaaggcggctgggcgtcgacctacctg
atcgaccagtccaagacccgtcttgagcgcctgggcttcttcaaggaagtcaacgtcgag
accccgcaggtgcctggcaccgacgaccaggtcgacgtcaactatagcgtcgaagagcag
gcctcgggttcgatcaccgccagcgtcggtttcgcccagagcgccggcctgatcctgggt
ggttcgatcagccagagcaacttcctcggtaccggtaacaaggtatccatcggcctgacc
cgttcggaataccagacccgttacaacttcggcttcgttgatccctacttcaccgccgat
ggcgtcagcctgggctacaacgccttctaccgcagcaccgattacgacgacctcgacgtc
gacgttgccagctatgcggtggacagctacggtgccggcgtcagcctgggctacccgatc
agcgaaacctcgcgcctgacctacggcctgagcgtgcagcaggacaagatcaagaccggc
aagtacaccgttgacgagatcttcgacttcctcgagcaggaaggtgacaacttcctgaac
ttcaaggcctcgatcggctggtccgagtcgaccctgaacaaaggcgtactggccacccgt
ggtcactcgcaaagcctgaccctggagtccaccgttccgggcagcgacctgtcgttcttc
aagcttgactaccgtggccagctgttcaagccgatcaccagcgactacaccctgcgcctg
cataccgagctgggctatggtgatggttacggtagcacctccggtctgccgttctacgag
aactatttcgcaggtggtttcaactccgtccgtggcttcaaggacagcagcctgggcccg
cgtagtaccccgagcatcggcgaggccgcaggtggcaagccaggcaccatcgccgacccg
gatcaggatccgttgccgtttggtggtaacgtgctggtacaaggcggtgccgagctgctg
ttcccgctgccgttcgtcaaggaccagcgttcactgcgcacttccgtgttctgggacgtg
ggtaacgtgttcgacaccaattgcggcaacaaacctgattgcgagaaggtcggattctcg
ggcatggccagttcggtcggcctgggcgtgacctggattaccgcactgggcccgctgagc
ttcagcctggcaatgccggtcaagaagccggacgatgccgatacccaggtgttccaattc
tctctgggccagaccttctaa
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