Pseudomonas putida BIRD-1: PPUBIRD1_4063
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Entry
PPUBIRD1_4063 CDS
T01975
Symbol
lysS
Name
(GenBank) LysS
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPUBIRD1_4063 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppb01007
]
PPUBIRD1_4063 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppb03016
]
PPUBIRD1_4063 (lysS)
Enzymes [BR:
ppb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PPUBIRD1_4063 (lysS)
Amino acid related enzymes [BR:
ppb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PPUBIRD1_4063 (lysS)
Transfer RNA biogenesis [BR:
ppb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PPUBIRD1_4063 (lysS)
Prokaryotic type
Other AARSs
PPUBIRD1_4063 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADR61645
LinkDB
All DBs
Position
complement(4543052..4544554)
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AA seq
500 aa
AA seq
DB search
MSDLKTESQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEE
LEAAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFR
VRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRAREIARKAGAKVLGH
EGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaagaccgaatcgcaagacctgcaacaggaagaaaacgccctgatcgcc
ctgcgcaaggaaaaacttgccgccgagcgcgccaagggcaatgccttccccaacgacttc
cgtcgcgacagctactgcaacgacctgcagaagcagtatgcggacaagaccaaggaagag
ctggaagcagccgcgatcccggtcaaggtcgccggccgcatcatgctcaaccgtggttcg
ttcatggtcatccaggacatgactggccgtattcaggtctacgtcaaccgcaagaccctg
ccggaagaaaccctggccgcggtcaagacctgggacctgggcgacatcatcagcgccgaa
ggcaccctggcccgttccggcaagggcgacctgtacgtcgaaatgaccaacgtgcgcctg
ctgaccaagtcgctgcgcccgctgcccgacaagcaccacggcctgaccgacaccgagcag
cgctaccgtcagcgctacgtcgacctgatggtcaacgaagaaacccgccacaccttccgt
gtgcgttcgcaggtgatctcgcacatccgcaagttcctcatcgagcgtgacttcctcgaa
gtcgagacgccgatgctgcagaccatcccgggcggcgccgctgccaagccgttcgaaacc
caccacaatgccctggacatggccatgttcctgcgtatcgcgccggagctgtacctcaag
cgtctggtggtcggtggttttgagaaagtgttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgctcgagttctaccaggcctacgcc
gactaccgcgacaacatggacctcaccgaggaactgttccgcgagctggcgcaactggta
ctgggctctaccgacgtaccgtacggcgacaaggtcttccacttcggcgagccgttcgta
cgcctgtcggtgttcgactcgatcctcaagtacaacccggagctgaccgccgccgacctg
caggacgtcgaccgcgcccgcgagattgccaggaaggccggcgccaaggtgctgggccat
gaaggcctgggcaagctgcaggtgatgattttcgaagagctggtcgagcacaagctggaa
cagccgcacttcattaccgagtacccgttcgaagtgtcgccgctggcccgtcgcaacgac
gacaacccggccgttaccgaccgtttcgagctgttcatcggtggccgcgaaatcgccaac
gcctactccgagctcaacgatgccgaagatcaggccgagcgcttcctggcccaggtggcc
gagaaggacgcgggtgacgatgaagccatgcactatgacgccgacttcgttcgtgcgctg
gagtacggcatgccgccgaccgccggtgaaggcatcggcatcgaccgcctggtgatgctg
ctgaccaactcgccgtcgatccgcgacgtcatcctgttcccgcacatgcgtccgcaggcc
tga
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