Pseudomonas putida BIRD-1: PPUBIRD1_4113
Help
Entry
PPUBIRD1_4113 CDS
T01975
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_4113
Transporters [BR:
ppb02000
]
Other transporters
Pores ion channels [TC:
1
]
PPUBIRD1_4113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ADR61695
LinkDB
All DBs
Position
4594689..4596734
Genome browser
AA seq
681 aa
AA seq
DB search
MLYTPLRLSPLAVALWLAASPSQAVELEPQVITANPLGNRQLAAPSTVLEGDNLLQQQHG
SLGETLNKQPGVASTWFGPGASRPVIRGLDGDRIRILRNGVGALDASSLSYDHAVPLDPV
TVDRVEIVRGPAALLYGGNAIGGVVNTFDNRIPDSPIEGIHGAGELRYGGADTTRSSAGK
LEAGDGAFALHLDANSRQFNDLRIPGYARSAKVRDADEPGSKHRLENSDGRQDGGAIGGS
YHWDHGYAGLSYSGYDSNYGSVAESGVRLDMKQDHYAFASELRDLDGPFSSVKVDAGYTD
YEHSEIEEGEVHTTFKNKGYEARIEARHQPLGPVEGVIGAQVSRNEFSALGEEAFVPHTD
TDSVALFMLEQWQATERLNLSLGARMEHTRVDPDAKGNENFVDADSASSFNAFSLSSGAV
YQFDPIWSLAANLGYTERAPTFYELYANGAHVATGAFEVGDTGLNKEKAISADLALRFDN
GTHKGSVGVFYSHFRNYIGLIGTGNLREGGHDHDHDEDDHDHDHDDGFPEYQYQGVRARF
YGIEAQDRWQLVENRYGSFALELSGDYTRAKNLDSGEPLPRIAPLRLNSGLVWELDRWQA
RVDVQHAASQHRKPANETSTDGYTTLGASVGYRFDIGQSQWLAFVRGENLTDQTVRYASS
ILRDIAPAPGRSVEVGLRTTF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacacaccgcttcgcctctccccccttgccgtcgcactttggctggctgcatcc
cccagccaggccgtagaacttgagccgcaggtcatcaccgccaacccgttgggcaaccgc
caactggcggctcccagcaccgtgctcgaaggcgacaacctgctgcaacagcagcacggc
agcctcggtgaaaccttgaacaagcagcccggtgttgcctctacctggttcggccctggc
gccagccgaccggtgatccgcggcttggatggcgaccgcattcgtatcctgcgcaatggc
gtcggtgccctggatgcctcgtcgctgtcctatgaccacgccgtgcccctggacccggtg
acggtcgaccgcgtcgaaatcgtccgcggcccggccgccttgctgtatggcggtaatgcc
attggcggcgtggtcaacaccttcgacaaccgtatcccggactcgccgatcgagggcatc
cacggtgccggtgaactgcgttacggcggcgccgacaccacccgcagcagcgccggcaag
ctggaggccggcgacggcgccttcgccctgcacctggatgccaacagccgccagttcaac
gacctgcgcatcccgggctacgcacgcagcgccaaggtgcgcgatgccgacgagcccggc
agcaaacaccgcctggaaaacagcgacggtcgccaggacggcggcgcaatcggtggtagc
taccactgggaccacggctatgccggcctgtcgtacagcggttacgacagcaactatggc
tcggtggccgagtccggcgtgcgcctggacatgaaacaggatcactacgccttcgcctcc
gaactgcgcgacctcgacggcccgttcagctcagtcaaggtagatgccggttacaccgac
tacgaacacagcgaaatcgaggaaggcgaggtccataccaccttcaagaacaagggctac
gaagcccgcatcgaagcccgtcaccagccgctaggacctgtggaaggggtcattggggcc
caggtcagccgtaacgaattttcggccctcggcgaggaagccttcgtcccgcataccgat
accgacagcgtggcgctgttcatgctcgaacagtggcaagccaccgagcggctgaacctg
agcctgggcgcgcgcatggagcacacccgcgtagacccagacgccaaaggcaacgagaac
ttcgtcgacgccgacagcgccagcagcttcaacgcctttagcctgtcgtcgggagctgtg
taccagttcgacccaatctggtcgctggccgctaaccttggctacaccgagcgcgcccct
accttttacgagctgtacgccaatggcgcgcacgtagccaccggcgcgtttgaagtcggt
gacaccggcctgaacaaggaaaaggccatttccgccgacctggcgctgcgcttcgacaac
ggcacccacaagggcagtgttggggtgttctacagccattttcgcaactacatcggcctg
atcggcacgggcaacctgcgtgagggcggacatgatcacgaccatgacgaggatgaccac
gaccacgatcatgacgacggcttcccggaataccagtaccaaggcgtgcgggcgcgcttc
tacgggatcgaggcccaggaccgctggcaactggtcgagaaccgttacggcagctttgcg
ctggagttgtccggtgactacacccgggccaagaacctggacagcggcgagccactgccc
cgcatcgccccgctgcgcctgaacagcggcctggtctgggaactggaccgctggcaggcg
cgggtagacgtgcagcacgctgcgtcgcagcaccgcaaacccgccaacgaaaccagcacc
gatggctacaccaccttgggcgcgagcgttggctaccgcttcgacattggtcaaagccag
tggttggcgtttgtgcgcggcgaaaacctgaccgaccagaccgtgcgctatgccagttcg
atcctgcgcgatatcgcaccggcgccggggcgcagtgtggaagtcgggttgcgtaccacc
ttctga
DBGET
integrated database retrieval system
