Pseudomonas putida BIRD-1: PPUBIRD1_4230
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Entry
PPUBIRD1_4230 CDS
T01975
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00300
Lysine biosynthesis
ppb00550
Peptidoglycan biosynthesis
ppb01100
Metabolic pathways
ppb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPUBIRD1_4230
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPUBIRD1_4230
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PPUBIRD1_4230
Enzymes [BR:
ppb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PPUBIRD1_4230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ADR61807
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Position
complement(4723851..4725218)
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AA seq
455 aa
AA seq
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MLKPLSLSQLTTALKGQHIGGDATFTGVSIDSRSVSAGQLFVALAGPRFDGHDYLADVKA
KGAVAALVEREVAGVDLPQLLVKDCRVALGQLGALNRAAFDKPVVAITGSSGKTTVKEML
ASILRTRGLVHATRGNLNNDLGAPLTLLEIAPEHSAAVIELGASRIGEIRYTVGLTQPQV
VIINNAGTAHVGEFGGPDKIVEAKGEILEGLGQGGIAILNLDDKAFDIWKARAGAHKVVS
FARGNPKADFHASDIGRDARGCPSFTLHGAGETVAVQLNVLGEHNVSNALAAAAAAHAVG
LSLSGIAAGLAAVQPVKGRTVAQIAPNGVRVIDDSYNANPTSMCAAIDILAGFSGRTVLV
LGDIGELGQWAEEGHRQVGDYARGKVDALYAVGSNMAHAVKAFGANGRHFATQAELIDAV
SAENASDTTILIKGSRSAAMENVVAALCGASGEKH
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagccgttgtcactcagccagctgaccacagcactgaagggtcaacacatcggt
ggcgacgccacgttcaccggcgtcagcatcgatagccgcagtgtcagcgccgggcaactg
tttgtcgccctggccggcccgcgtttcgatggccatgactacctggcagatgtgaaagcc
aaaggcgcagtagcagctttggtcgagcgagaagtggccggtgtcgacctgccgcagttg
ctggtcaaggattgccgggtagcactgggtcagctcggcgccctgaaccgcgcggctttc
gacaagcctgtagtggccattaccggttccagcggcaagaccacggtcaaggaaatgctc
gccagcatcctgcgtacccgtggcctggtgcacgccactcgcggcaacttgaacaatgac
ctcggtgcaccgctgacactgctggagatcgccccggagcacagcgcagcagtgatcgaa
ctgggcgcctcgcgcattggcgaaatccgctacaccgtaggcctgacgcaaccgcaggtg
gtgatcatcaacaacgccggtactgcccacgttggcgaattcggcggcccggacaagatc
gtcgaagccaaaggcgagattcttgaaggcctgggccagggcggtattgccatcctcaac
ctggacgacaaagcctttgacatctggaaggcgcgtgccggtgcgcacaaggtcgtcagt
ttcgcacgcggcaacccgaaggccgatttccacgcgtcagacattggtcgcgatgcccgt
ggctgcccgtccttcaccctgcatggcgccggtgaaacggtagccgtgcaactcaatgtg
ctgggtgaacacaacgtcagcaatgccttggccgccgccgccgctgcacatgccgttggt
ctgagcctgagcggcatcgccgccggcctggctgcggtgcaaccggtcaaggggcgtacc
gtggcgcagatcgcgccgaacggggtacgggtaatcgacgacagttacaacgcaaatccc
acctctatgtgcgcagcgattgatatactcgccggcttttccggacgcaccgttctggtg
cttggggatatcggcgaattggggcaatgggcggaagaaggccaccgtcaggtgggtgac
tacgcgcgtggcaaggttgacgccctgtacgcggtgggttccaacatggcacatgcggtc
aaggcgttcggcgccaatggccgccatttcgctactcaagctgagctgatcgatgcggtt
agcgccgagaatgccagtgacaccactatcttgatcaagggctcgcgcagcgctgcgatg
gaaaacgtcgtggcggcattgtgcggtgccagcggggagaaacattaa
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