Pseudomonas putida BIRD-1: PPUBIRD1_4369
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Entry
PPUBIRD1_4369 CDS
T01975
Name
(GenBank) GGDEF domain-containing protein
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPUBIRD1_4369
Enzymes [BR:
ppb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PPUBIRD1_4369
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Paralog
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
Motif
Other DBs
NCBI-ProteinID:
ADR61942
LinkDB
All DBs
Position
complement(4868180..4869451)
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AA seq
423 aa
AA seq
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MKPTRKRTVRPTLRSVLGRGHLSVALLAVGLAGISLTLLGVLALRVYANHNLQLIARSIN
YTVEAAVVFDDSAAANESLALIASTEEVAEAKVFNNEGEQLAHWQRDNTGMLAQLEVQVA
SALLDEPVMLPIVHQQQQVGHIELAGQGRSLLLFLLSGLAGILFCTVLSALAAQYLSRRL
LNDITRPLRGLASVAHAARRERSFDRRVPEAPIAELNELGNDFNALLDELEVWHSHLQSE
NQTLAHQASHDSLTGLPNRAFFEGRLSRSVLNAARQQDHLALLFLDSDHFKQINDTLGHA
VGDEVLISVAERVRAQLREQDLVARLGGDEFAVLLTPLHTRKDAEHIAEKIVASMKLPVQ
LDSGLSVSTSLSVGIAYYPDDGADPASLLNAADAAMYQAKRKRRGHWQVAQTERSANEIR
NRS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgacccgcaagcgtaccgtacgcccgaccctgcgatcggtgctaggccgtggc
cacctcagcgtcgctctgcttgccgttggcctggcgggtatctccctcaccctgctgggc
gtgctcgccctgcgtgtctatgccaaccataacctgcagttgatcgcccgctcgatcaac
tacacggtagaggcagcggtggtgttcgatgacagcgccgccgccaatgaatcgctggcg
ctgattgccagtaccgaagaagtggccgaggccaaggtcttcaacaacgagggcgagcaa
ctggcgcactggcaacgcgacaatacgggcatgctcgcgcagctggaggtgcaggttgcc
agcgccttgctggatgagccggtcatgttgccgatcgtgcaccaacaacagcaggtcggg
cacatcgagctggcaggccagggcaggagcctgttgctgttcctgctcagtggcttggcc
ggtatcctgttctgcacggtcctcagcgccttggctgcccagtatctgtcgcggcgcctg
ctcaacgatatcacccgcccgctgcgtggcctggccagtgtcgcccatgccgcccgccgc
gagcgcagcttcgaccggcgcgtgccagaagcgccgattgccgagctgaacgagctgggt
aacgacttcaatgccctgctggatgaactggaggtgtggcatagtcacctgcagagcgaa
aaccagaccctggcccatcaggccagccacgacagcctgaccggcttgcccaaccgcgcc
ttctttgaagggcgcctaagccgcagcgtgctgaatgcggcgcgtcagcaggaccacctg
gcactgctgttcctcgacagcgaccacttcaagcagatcaacgacaccctcggccacgcc
gtgggtgacgaggtgttgatcagcgtggccgaacgtgtgcgcgcccagctgcgcgagcaa
gacctggtggcgcgcctggggggcgacgagtttgctgtgctgctgacgcctttgcatacg
cgcaaggacgccgaacacattgccgagaagatagttgccagcatgaagctgccggtgcaa
ctggacagtggcctcagtgtctccacctcgctaagtgtcggaattgcctattacccggat
gacggcgctgaccccgccagtcttctgaatgccgccgatgcggcaatgtaccaggccaag
cgcaaacgccgtggccattggcaagtggcgcagacggaacggtccgccaacgaaatcagg
aacaggagttga
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