Pseudomonas putida BIRD-1: PPUBIRD1_4383
Help
Entry
PPUBIRD1_4383 CDS
T01975
Symbol
mrcB
Name
(GenBank) MrcB
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00550
Peptidoglycan biosynthesis
ppb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPUBIRD1_4383 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppb01003
]
PPUBIRD1_4383 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
PPUBIRD1_4383 (mrcB)
Enzymes [BR:
ppb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PPUBIRD1_4383 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PPUBIRD1_4383 (mrcB)
Glycosyltransferases [BR:
ppb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PPUBIRD1_4383 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PPUBIRD1_4383 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ADR61956
LinkDB
All DBs
Position
complement(4893244..4895490)
Genome browser
AA seq
748 aa
AA seq
DB search
MKLSLVGLVIVAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFTGQKLSKNDFLTELD
ALGYRRESAANGPGAASVNGNTVDLNTRGFQFYEGMEPAQFVRVRFSGDYVAGLSGANGK
ALDVVRLEPLMIGGIYPKNLEDRILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIAR
AMWVNTSSGSMRQGGSTLTQQLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAY
LNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERAL
ARRNLVLDLVAEQGVASQAEVDAAKKMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDE
DLTEEGLRIFTSFDPILQMKAETSMSETFKRLAGRKGADDVEAAMVVTNPETGEVQALIG
SRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTLTSWVQDEPFSVKGADGQVWR
PQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIKTIGRLGVNVDWPAFPAMLLG
AGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPLKRYPFQIQQTFDPGAIYLVQN
AMQRVMREGTGRSVYNTLPRSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKT
PFTGATGALQVWTSFMKKADPLPLDMPQPDNVVQAWIDPYSGHGSDASCPGAVQMPYIRG
SEPPAGAACGGEQDPVESVMDWVKGWMN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctcagcctggttggcctggtgatcgttgccggcttcgcggtttacctcgatgcc
gtcgtccaggaaaagttctccggcaagcgctggaccatcccggccaaagtgtatgcccga
ccgctggagctgttcaccggccagaagttgagcaagaacgacttcctcaccgagctcgat
gcgctcggctaccgtcgcgaaagcgcggccaacggcccgggcgctgcgtccgtcaacggc
aataccgtcgacctcaatacccgtggcttccagttctacgagggtatggaaccggcgcag
ttcgtccgcgtgcgcttctctggcgattacgttgcgggcctttccggtgccaacggcaag
gcgcttgacgtggtgcggctggagccgctgatgatcggcggcatctatccgaaaaatctc
gaagaccgcatcctgatcaagatcgatcaggtacccaaatatctgctcgaaaccctggtg
gcaacggaggaccgcgagttctacagccacttcggcgtgtcgccaaagtccatcgcccgg
gccatgtgggtcaacacgtcgtccggctcgatgcgccagggtggcagtaccctgacccag
caattggtgaagaacttctacctcagcagcgagcgcagcctcagccgcaagctgaccgag
gcgatgatggcggtcctgctcgaactgcactacgacaaacgcgaaatccttgaggcctac
ctcaacgaggtgttcgtcggccaggacggtcaacgcgcggtgcacggctttggtctggct
agccagttcttcttcagccagccgctgtctgagctgaaactgcatcagatcgccctgctg
gtgggcatggtcaaaggcccgtcctactacaacccgcggcgtcaccccgagcgggccctg
gctcgccgcaacctggtgctcgacctggtggccgaacagggcgtggccagccaggcagaa
gttgatgcggcgaagaaaatgccgttgggcgtgacaaagcgtggcagcctggccgacagc
tcgttcccggctttcctcgacctggtcaagcgacagctgcggcaggactaccgcgatgaa
gacttgaccgaagagggcctgcgtatctttaccagcttcgacccgatcctgcagatgaag
gctgaaacctcgatgagcgagaccttcaagcgcctggcgggccgcaagggggcagacgat
gtggaagcggcgatggtcgtgaccaaccctgagaccggtgaagtacaggcgctgatcggt
agccgccaggcaggcttcgccggcttcaaccgggccatcgatgctgtgcggccgatcggc
tcgttggtcaagccgtcggtatacctgactgcgctggagcagccgagcaagtacaccctg
accagttgggtgcaggacgagccattttcggtcaagggggctgacggccaagtctggcgc
ccgcaaaactatgaccgccgcccgcatggcactatctacctgtatcaggggctggccaac
tcctacaacctgtcgaccgccaagcttggcctggaagtgggtgtgccgaacgtgatcaag
accattggtcgtttgggcgtgaatgtcgactggcctgcattccctgccatgttgctgggg
gcaggtggcatgtcgccgatgcaggtggcaaccatgtaccagaccatcgccaacggcggc
ttcaacacgccgatgcgcggcatccgcagcgtgctcaccgccgagggcgagccgctcaag
cgctacccgttccagatccagcagaccttcgacccaggtgccatttacctggtgcagaac
gccatgcaacgcgtaatgcgagaaggtacagggcgttcggtgtacaacaccttgccgcgc
tcgctgaccctggcgggcaagaccggtaccagtaacgactcgcgtgacagctggttctcc
ggcttcagtcaggatctgctggccgtggtgtggatggggcgtgacgataacggcaagaca
ccgtttaccggcgccaccggcgccttgcaggtgtggaccagcttcatgaagaaggccgac
ccgctgccgctggatatgccgcaaccggacaacgtggtgcaggcctggatcgacccctac
agtggccatgggtctgatgccagctgtccgggagcggtgcagatgccgtatattcgcggg
agtgagccgccggccggcgcagcctgtggcggcgagcaggacccagtagaatcggtaatg
gactgggtcaaaggctggatgaattaa
DBGET
integrated database retrieval system
