Pseudomonas putida BIRD-1: PPUBIRD1_4414
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Entry
PPUBIRD1_4414 CDS
T01975
Symbol
nusA
Name
(GenBank) NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppb03021
]
PPUBIRD1_4414 (nusA)
03009 Ribosome biogenesis [BR:
ppb03009
]
PPUBIRD1_4414 (nusA)
Transcription machinery [BR:
ppb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PPUBIRD1_4414 (nusA)
Ribosome biogenesis [BR:
ppb03009
]
Prokaryotic type
rRNA transcription factors
PPUBIRD1_4414 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_KhpA-B
DUF507
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ADR61987
LinkDB
All DBs
Position
complement(4931088..4932569)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPPGVIFEALEVALATATKKRFEDEVDLRVEINRHTGSYETFR
RWTVVDEADLDDPAIETWLDKIKDTHPEAKVGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERVGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIIPRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPQMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVAEDNLAQAIGRGGQNVRLASQLTGWTLNVMTEKDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAAELAVRGVVNREDLAEQSIDDLLDIDGIDEERA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgaatcggtatccaacgaaaaaggtgtaccgccc
ggcgtcattttcgaagcgctggaagtggccctggccactgcaaccaaaaaacgttttgaa
gacgaagtcgacctacgtgtggaaatcaaccgccacaccggtagctacgagactttccgt
cgctggaccgtggtcgacgaagccgatcttgatgatccggcgatcgagacctggctggac
aagatcaaggacacccaccctgaagccaaggtcggtgacgtgatcgaagagaagatcgag
tccatcgagttcggtcgtattgccgcccagaccgccaagcaggtcatcgtgcagaaggtc
cgtgaggccgagcgtgcccaggtggtcgatgcctaccgtgagcgcgttggcgagatcatc
tccggtaccgtaaaaaaggttacccgcgacaacgtcatcgttgacctgggcaacaacgcc
gaggccttgctggctcgcgaagacatcattccgcgcgaaaccttccgtgttggcgtgcgc
ctgcgtgcgctgctcaaggaaattcgcaccgaaaaccgtggcccacagctgattctgtcg
cgcaccgcgccgcagatgctgatcgagcttttccgcattgaagtgccggaaattgccgag
ggcctcatcgaagtcatggctgcttcccgtgatccgggttcgcgagccaagattgccgtc
cgctccaaggacaagcgtatcgatccgcaaggtgcctgtatcggcatgcgtggttcgcgc
gtccaggccgtatccggggagctgggtggtgagcgtgtggatatcgtcctgtgggacgat
aacccggcgcagttcgtcatcaacgccatgtcgccggctgaagtcgcggcgatcatcgtt
gatgaagatgcccatgcaatggacatcgccgtcgccgaggacaacctggcccaggccatt
ggccgtggcggtcagaacgttcgcctggccagtcagttgaccggctggaccctgaacgtg
atgaccgagaaggacatccaggccaagcaacaggccgaaaccggtgacatcctgcgcaat
ttcatcgaggaactggaagtcgacgaggagctggcccaagtgctggtcgacgaaggcttc
accagccttgaagaaattgcctacgtaccgttggaagaaatgctcaacatcgatggcttt
gacgaagacatcgtcaatgagctccgcgctcgagccaaggaccgtttgttgaccaaggcc
atcgctaccgaagaaaaactggcagacgcccacccggccgaagacctgctctcccttgag
ggcatggacaaagacctggcggctgaactggcggtgcgcggcgtggttaaccgcgaagac
ctggccgagcagtcgatcgacgatctgctcgacatcgacggcatcgacgaagagcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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