Pseudomonas putida BIRD-1: PPUBIRD1_4524
Help
Entry
PPUBIRD1_4524 CDS
T01975
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb03030
DNA replication
ppb03430
Mismatch repair
ppb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPUBIRD1_4524
03430 Mismatch repair
PPUBIRD1_4524
03440 Homologous recombination
PPUBIRD1_4524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppb03032
]
PPUBIRD1_4524
03400 DNA repair and recombination proteins [BR:
ppb03400
]
PPUBIRD1_4524
Enzymes [BR:
ppb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPUBIRD1_4524
DNA replication proteins [BR:
ppb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPUBIRD1_4524
DNA repair and recombination proteins [BR:
ppb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPUBIRD1_4524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Pantoate_transf
Motif
Other DBs
NCBI-ProteinID:
ADR62089
LinkDB
All DBs
Position
complement(5047610..5048221)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPGTGCRATEVAVVMLEGGRIVERYQSLMNAGVPVPAFVAGLTGIT
TAMLRSAPPVEKVMNEVAEFVGGTPLLAHNAAFDQKFWDYELSRIGRSRSQPFACSLLLS
RRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQHLAGVLRQDHGVQQLSHE
LLCRLQKTPAAKLREALAKYCRD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtatcgctgtcatcgactttgaaaccaccggcatttcccccggtaccggctgc
cgtgccaccgaggtggcggtggtaatgcttgaaggtgggcgcattgtcgagcgctaccag
agcctgatgaacgctggcgtgccggtgccggccttcgtcgcagggctgaccggcatcacc
accgccatgctgcgcagtgcgccgccggtggagaaagtgatgaacgaggtggccgagttc
gtcggtggcaccccattgttggcgcacaacgctgctttcgaccagaagttctgggactac
gagctaagccgtattggccgcagccgcagccagcccttcgcgtgttccctgttgctgtca
cggcgcctgctgcccgcggcgccgaaccacaagctgggcactttgacacgctgggctggg
ttgccggacacggggactgcgcaccgggccatggccgatgccgaaatggccgccaacctg
ctgcagcatctggcgggtgtgttgcgccaggaccacggggttcagcaactgtcgcacgag
ctgctttgccggctgcagaagaccccggctgcgaagctgcgcgaagcgctggccaagtac
tgcagggattag
DBGET
integrated database retrieval system
