Pseudomonas putida BIRD-1: PPUBIRD1_4559
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Entry
PPUBIRD1_4559 CDS
T01975
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppb03000
]
PPUBIRD1_4559
03036 Chromosome and associated proteins [BR:
ppb03036
]
PPUBIRD1_4559
Transcription factors [BR:
ppb03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PPUBIRD1_4559
Chromosome and associated proteins [BR:
ppb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PPUBIRD1_4559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
HTH_Crp_2
MarR_2
HTH_IclR
Fe_dep_repress
HTH_34
HTH_1
HTH_20
DUF7343
HVO_A0261_N
HTH_11
HTH_36
Rrf2
HemN_C
BTRD1
LexA_DNA_bind
HTH_5
HxlR
HTH_3
TrmB
Crp
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
ADR62122
LinkDB
All DBs
Position
5101559..5102035
Genome browser
AA seq
158 aa
AA seq
DB search
MSKLDRYDLSILAELQRDARISNQELAERIGLSPSPCSRRVKQLEDDGYISRQVALLDRK
KLGLSLTAYVLIGMDRHTPERFETFEAAIRNLPQVLECSLVTGMDADYQLKVVVPDMDHY
QKLLLGSLTRIEGVTSVRSSFVLNQVLASTELPLTHLR
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacttgaccgctacgacctgagcatcctcgccgaattgcagcgcgatgcgcgc
atttccaaccaggaattggccgaacgcatcggcctgtcgccatcgccatgctcgcgtcgg
gtcaagcaactggaggacgacggctacatctcgcgccaggtggccctgctcgaccgcaag
aagctgggcctgagcctgaccgcctatgtgctgatcggcatggatcgccacaccccggag
cgctttgaaacattcgaggccgccatccgcaacctgccacaggtgctcgaatgcagcctg
gtcactggcatggatgccgactatcagttgaaagtggtggtgccggacatggaccattac
cagaaactgcttctcggcagcctgacccgtatcgaaggcgtcaccagcgtgcgctcgagc
ttcgtgctcaatcaggtactggccagcaccgagctgccattgacccacctgcgttaa
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