Pseudomonas putida BIRD-1: PPUBIRD1_4687
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Entry
PPUBIRD1_4687 CDS
T01975
Name
(GenBank) Putative iron-sulfur cluster binding protein
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppb03016
]
PPUBIRD1_4687
Enzymes [BR:
ppb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
PPUBIRD1_4687
Transfer RNA biogenesis [BR:
ppb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPUBIRD1_4687
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
QueG_DUF1730
Fer4_16
Fer4_9
Fer4_7
Fer4_10
Fer4
Fer4_21
Fer4_2
Fer4_6
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ADR62245
LinkDB
All DBs
Position
5229631..5230695
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AA seq
354 aa
AA seq
DB search
MSASAPDLAQLAQSIKIWGQELGFAHVGIAGVDLGEHEHHLQRWLDAGYQGEMEYLGAHG
SKRSHPDQLIPGTVRVVSLRMDYLPGDTQMAQRLAQPEKAYVSRYALGRDYHKLVRKRVQ
FLADRIQEAIGPFGYRAFVDSAPVLEKALAEQAGLGWIGKNTLLLNRKAGSYFFLAELFV
DLPLPVDEATTSEHCGRCQACLDICPTQAFVGPYVLDARRCISYLTIELRGAIPVELRAK
MGNRVFGCDDCQIVCPWNRFAKHSQEQDFQPRHGLENTDLAAMFLWDERTFLRKTEGGPL
RRAGYERFLRNLAVGLGNAPSTIPVIEALKARRDDESELVREHVEWALARHGAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctctgcacctgacctcgcccaactggcccaatcgatcaagatttggggccag
gaactcggttttgcccatgttggcatcgccggggtcgaccttggcgaacacgaacaccac
ctgcagcgttggctcgacgccggttatcagggtgaaatggaatacctgggcgcccacggc
agcaaaaggtcacaccccgaccagctgatccccggcacggtacgcgtggtctcgctacgt
atggactacctgcccggcgacacgcagatggcgcagcgcctggcccagccggagaaggcc
tacgtgtcgcgctacgcgcttggccgggactaccacaagctggtgcgcaagcgcgtgcaa
ttccttgccgaccgcattcaggaggccatcggcccgttcggctaccgcgcctttgtagac
agcgccccggtacttgaaaaagccttggccgaacaggccgggctgggctggatcggcaag
aacacgctgttgctcaaccgcaaggcgggtagctacttcttccttgccgaactgttcgtc
gacctgccgctgccggtggacgaagccaccaccagcgagcactgcgggcgttgtcaggcc
tgcctggacatctgcccgacacaggcgtttgtggggccctatgtgctggatgcgcggcgc
tgtatctcgtacctgaccatcgagctaaggggcgcgatccctgtcgagttacgcgcaaag
atgggcaaccgagtgttcggttgcgacgactgccagatcgtctgcccctggaaccgtttt
gccaagcacagccaggagcaggacttccagccacggcacgggctggaaaataccgacctg
gcggcgatgttcctgtgggatgaacgcaccttcctgcgcaagaccgagggcgggcctttg
cggcgggcggggtacgagcggttcttgcgcaacctggcggtggggttgggcaatgcgccc
tccacgattcccgtgatcgaggcgctgaaggccaggcgtgacgatgaatcggaattggtg
cgtgagcatgtggagtgggcgctggcccgacacggagctcaatag
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