Pseudomonas putida BIRD-1: PPUBIRD1_5077
Help
Entry
PPUBIRD1_5077 CDS
T01975
Name
(GenBank) Extracellular solute-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb02010
ABC transporters
ppb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPUBIRD1_5077
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPUBIRD1_5077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_5077
Transporters [BR:
ppb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PPUBIRD1_5077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
ADR62624
LinkDB
All DBs
Position
5682904..5684493
Genome browser
AA seq
529 aa
AA seq
DB search
MRAAALSLLFTSLFAAGVAQAAPLSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVEF
DAAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTPYFKPGRKLNADDVLFSFQRMLY
PAHAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIYS
AEYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAVDPLIFAIT
TDANVRLQKLKRGECQVALSPKPLDIVEAGQDGNLKVATTPAFMTAFVAINTQHPPLDKA
EVRQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAG
LAEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGVKAEIRVIEWGELIRRAKAGEHD
LLFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLY
QQAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTVTK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccgccgcactttccttattgttcacctccctgttcgccgccggcgttgcccag
gccgctccgctgagcgtttgcagcgaggccagccccgaaggcttcgacgtggtgcagtac
aattcgctcaccaccaccaacgccaccgccgacgtgctgatgaaccgcctggtggagttc
gatgcggcgcaaggcaaggtggtgccgagcctggcgaccagctggacggtatcggccgac
ggcctggtgtatgacttcaccctgcgcgatgacgtcaagtttcacagcaccccctacttc
aagccaggccgcaagctgaatgccgacgacgtgctgttcagcttccagcgcatgctctac
ccggcccatgcctggcacaagactgcaccgggcggctacccgcatgcccaatcgctgcag
ctgggcagcctgatcaaggcgatcgaggcaccgtcgccgaacaccgtgcgcttcaccctc
agccacccggacgccaccttcctggccaccctgagcatgggcttcgcctcgatctactcc
gccgaatacgccgacaagctgctcaaggccggcacaccggaaaagctcaacaaccaaccg
atcggcaccgggccgttcgtgttccagcgtttccagaaagacgccgtggtgcgctaccgc
gccaacccggactacttcgccggcaagccggcggtcgacccgctgatcttcgccatcacc
accgatgccaacgtgcgcctgcagaagctcaagcgtggcgagtgccaggttgccctttcg
cccaagccgttggacattgtcgaagcgggccaggacggtaacctcaaggtggccaccacc
ccggcattcatgacagccttcgtcgccatcaacacccagcacccgccgctggacaaagcg
gaggtgcgccaggcgatcaacctggccttcgacaggcaagcctacctcaaggccgtgttc
gaagactctgctgtggcggccaacggcccctacccgcccaacacctggagctacgccaag
gacctgcccggctacccgctggacctgaagaaagccaaggccctgctggccaaggccggg
ctggccgaaggcttcagtaccaccatctggacccgtccctcgggaagcctgctcaatccc
aaccccagccttggcgcgcagatgctgcaagccgacctggcgaagattggcgtgaaagcg
gagatccgcgtgatcgagtggggcgaactgatacgccgcgccaaggccggcgagcatgac
ttgctgttcatgggctgggcgggcgacaacggcgacccggacaacttcctcagcccgcag
ttttcctgtgcggcggtcgagtcagggaccaacttcgcacgcttctgcgacagccgcctc
gaccagctgatcagcgccgggcgcaccaccaacgaccagagcgtgcgcagccggctgtac
cagcaggcgcagacactgatccagcagcaggcgctgtgggtgccactggcgcacccgacg
gcggcgaccttgctgcgccaaggcgtcgaggggtaccaggtaagcccgttcgggcggctg
gatttcagcaaggtgacagtgaccaagtaa
DBGET
integrated database retrieval system