Pseudopropionibacterium propionicum: HMPREF9154_0004
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Entry
HMPREF9154_0004 CDS
T02180
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF9154_0004 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_0004 (recF)
DNA repair and recombination proteins [BR:
ppc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF9154_0004 (recF)
BRITE hierarchy
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFN47156
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Position
3638..4804
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AA seq
388 aa
AA seq
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MFVTHLSVTDFRNYAAAELDLVAGVNVFVGSNGQGKTNLVEAVEYLSTMSSHRVSSTAPL
IRAGAESAILRGRVQASRDDERLITLELEVTNGRSNVARLNRAPLPRPRDLIGALRTVVF
SPTDLAIVRGDPSDRRAWLDTLVTTRWPRMAGVRADLDKILRQRNSLLKAMSGRSLRQAA
PEEDATLQAWNDALARIGAELLHARLDTLADVLPHAAGAYETIAPVNNRVSAQYKTSLDL
AGIPVDAVRETLEARLHEAMAGRRREEVTRGVTLVGPQRDDITLSIGDLPAKGYASHGES
WSLALALKLGGFALVRADGIEPVLVLDDVFSELDETRRERLAGVVADAEQVLITAAVGAD
VPDFPSARRFRVQGGAVEPAEEPGATDD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcacccatctgtcggtcaccgacttccgcaactacgccgccgccgagctggat
ctcgtcgccggcgtcaatgtcttcgtcgggtcgaacgggcagggcaagacgaacctggtc
gaggccgtcgagtacctctcgacgatgtcctcccaccgcgtctcgtcgacggcccccctg
atccgcgccggcgccgagtccgcgatcctgcgtggccgggtgcaggcctcccgtgacgac
gaacgcctcatcaccctagaactcgaggtgaccaacggccgcagcaacgtcgcccgcctg
aaccgtgctcccctgccgcggccccgcgacctcatcggtgcgctgcgcaccgtcgtattc
tcacccacggacctggccatcgtgcgcggcgacccgtcagaccggcgggcctggctggac
accctcgtcaccacccgctggccgcgcatggccggggtgcgggcggatctggacaagatc
ctcaggcagcgcaactcgctgctgaaggcgatgtccgggaggtcgctgcggcaggccgca
cccgaggaggacgccaccctgcaggcttggaacgacgccctggcgcggatcggtgccgag
ctgctgcacgcgcgtctcgacaccctggccgacgtcctcccgcacgccgccggggcctac
gagaccatagctccggtgaacaaccgggtctcggcacagtacaagacctccctggacctg
gcgggcattcccgtcgacgcggtccgcgagaccctcgaggcgcggctgcacgaggccatg
gctgggcgtcgccgtgaggaggtaacgcgaggggtgaccctcgtcggcccgcagcgcgac
gacatcaccctgtccatcggcgatctgccggccaagggatacgcctcgcacggcgagtcg
tggtcgctggcgcttgccctgaaactgggaggattcgccctggtgcgtgccgacggcatc
gaacccgtcctggtgctcgacgacgtgttctccgagctggatgagacccgtcgcgaacgc
ctcgcgggggtggtcgccgacgccgaacaggtgctcatcaccgccgctgtcggggcggac
gtccccgacttcccgtccgcgcggcggttcagggtgcagggcggggcggtcgaacccgct
gaggaaccgggagcgacggatgactga
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