Pseudopropionibacterium propionicum: HMPREF9154_0527
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Entry
HMPREF9154_0527 CDS
T02180
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF9154_0527 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_0527 (ung)
Enzymes [BR:
ppc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HMPREF9154_0527 (ung)
DNA repair and recombination proteins [BR:
ppc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF9154_0527 (ung)
Prokaryotic type
HMPREF9154_0527 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFN45480
LinkDB
All DBs
Position
complement(552125..552805)
Genome browser
AA seq
226 aa
AA seq
DB search
MARPLKELIAPDWAEALADVEDQIHAMGDFLRQELAEGRSYLPAGDNVLRAFSRPLADVR
VLIVGQDPYPTPGHAVGLSFSVAPDVRPIPRSLQNIYQELNADLGIPPAPHGDLSAWFEQ
GVLLLNRVLTVSPGKAGSHRGKGWEAVTTAAITALAERGGPLVAILWGRDAQSTRSLLGQ
TPVIASAHPSPLSARNGFFGSKPFSRTNEALVSQGADPVNWDLNNT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcccccttaaagaactcatcgcccccgactgggccgaggccctggccgacgtc
gaggaccagatccacgccatgggagattttctccgccaggaactcgcggagggacgcagc
tacctgcccgccggcgacaacgtgctgcgcgccttcagccgaccgctggccgacgtgcgg
gtgctgatcgtcgggcaggacccgtatccgaccccggggcacgcggtcgggctgtcgttc
tccgtcgcccccgacgtgcgccccatcccccgcagcctgcagaacatctaccaggaactc
aacgccgacctcggtatcccacccgccccgcacggcgacctgagcgcctggttcgagcag
ggcgtcctgctgctgaaccgagtgctgaccgtctcccccggcaaggctggatcgcaccgc
ggcaagggctgggaggccgtcaccaccgccgccatcaccgccctggcggagcgtggcggc
ccgctggtggcgatcctgtggggccgcgacgcacaatccacccgttccctgctgggccag
acccccgtcatcgccagcgctcatccatcgccgctgtcggcgcgcaacgggtttttcggg
tcgaaaccgttcagccgcacgaacgaggccctcgtgtcgcagggtgccgaccccgtcaac
tgggacctcaacaacacctga
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